RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
SDCBP2-201ENST00000339987 MT1EP04732 61 aa6.59□□□□□ -1.35
SDCBP2-201ENST00000339987 KRTAP12-3P60328 96 aa6.54□□□□□ -1.36
SDCBP2-201ENST00000339987 LCE1AQ5T7P2 110 aa6.5□□□□□ -1.37
SDCBP2-201ENST00000339987 SPRR2EP22531 72 aa6.5□□□□□ -1.37
SDCBP2-201ENST00000339987 SPRR2BP35325 72 aa6.5□□□□□ -1.37
SDCBP2-201ENST00000339987 SPRR2AP35326 72 aa6.5□□□□□ -1.37
SDCBP2-201ENST00000339987 KRTAP19-3Q7Z4W3 81 aa6.42□□□□□ -1.38
SDCBP2-201ENST00000339987 KRTAP2-2Q9BYT5 123 aa6.42□□□□□ -1.38
SDCBP2-201ENST00000339987 KRTAP2-1Q9BYU5 128 aa6.42□□□□□ -1.38
SDCBP2-201ENST00000339987 MT1LQ93083 61 aa6.4□□□□□ -1.39
SDCBP2-201ENST00000339987 LCE5AQ5TCM9 118 aa6.36□□□□□ -1.39
SDCBP2-201ENST00000339987 MT1GP13640 62 aa6.33□□□□□ -1.4
SDCBP2-201ENST00000339987 KRTAP15-1Q3LI76 137 aa6.32□□□□□ -1.4
SDCBP2-201ENST00000339987 SPRR2DP22532 72 aa6.27□□□□□ -1.41
SDCBP2-201ENST00000339987 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
SDCBP2-201ENST00000339987 MT1MQ8N339 61 aa6.24□□□□□ -1.41
SDCBP2-201ENST00000339987 GPR98Q8WXG9 6306 aa6.19□□□□□ -1.42
SDCBP2-201ENST00000339987 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
SDCBP2-201ENST00000339987 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
SDCBP2-201ENST00000339987 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
SDCBP2-201ENST00000339987 KRTAP4-3Q9BYR4 195 aa6.04□□□□□ -1.44
SDCBP2-201ENST00000339987 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
SDCBP2-201ENST00000339987 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.47
SDCBP2-201ENST00000339987 KRTAP4-9Q9BYQ8 210 aa5.89□□□□□ -1.47
SDCBP2-201ENST00000339987 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
SDCBP2-201ENST00000339987 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
SDCBP2-201ENST00000339987 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
SDCBP2-201ENST00000339987 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
SDCBP2-201ENST00000339987 KRTAP5-5Q701N2 237 aaPredicted RBP5.66□□□□□ -1.5
SDCBP2-201ENST00000339987 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
SDCBP2-201ENST00000339987 HMCN1Q96RW7 5635 aa5.63□□□□□ -1.51
SDCBP2-201ENST00000339987 KRTAP5-4Q6L8H1 288 aa5.62□□□□□ -1.51
SDCBP2-201ENST00000339987 NDUFAF8A1L188 74 aa5.61□□□□□ -1.51
SDCBP2-201ENST00000339987 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
SDCBP2-201ENST00000339987 KRTAP5-10Q6L8G5 202 aa5.54□□□□□ -1.52
SDCBP2-201ENST00000339987 MT4P47944 62 aa5.52□□□□□ -1.53
SDCBP2-201ENST00000339987 H3BS24 57 aa5.46□□□□□ -1.54
SDCBP2-201ENST00000339987 MT1AP04731 61 aa5.46□□□□□ -1.54
SDCBP2-201ENST00000339987 KRTAP6-1Q3LI64 71 aa5.38□□□□□ -1.55
SDCBP2-201ENST00000339987 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
SDCBP2-201ENST00000339987 KRTAP5-7Q6L8G8 165 aa5.36□□□□□ -1.55
SDCBP2-201ENST00000339987 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
SDCBP2-201ENST00000339987 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
SDCBP2-201ENST00000339987 KRTAP5-3Q6L8H2 238 aa5.27□□□□□ -1.57
SDCBP2-201ENST00000339987 KRTAP20-2Q3LI61 65 aa5.25□□□□□ -1.57
SDCBP2-201ENST00000339987 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
SDCBP2-201ENST00000339987 A0A0A0MQY5 61 aa5.05□□□□□ -1.6
SDCBP2-201ENST00000339987 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
SDCBP2-201ENST00000339987 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
SDCBP2-201ENST00000339987 MT3P25713 68 aa4.97□□□□□ -1.61
SDCBP2-201ENST00000339987 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
SDCBP2-201ENST00000339987 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
SDCBP2-201ENST00000339987 INE1O15225 51 aa4.72□□□□□ -1.65
SDCBP2-201ENST00000339987 MUC5ACP98088 5654 aa4.71□□□□□ -1.66
SDCBP2-201ENST00000339987 MUC5BQ9HC84 5762 aaPredicted RBP4.67□□□□□ -1.66
SDCBP2-201ENST00000339987 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
SDCBP2-201ENST00000339987 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
SDCBP2-201ENST00000339987 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
SDCBP2-201ENST00000339987 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
SDCBP2-201ENST00000339987 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
SDCBP2-201ENST00000339987 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
SDCBP2-201ENST00000339987 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
SDCBP2-201ENST00000339987 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
SDCBP2-201ENST00000339987 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
SDCBP2-201ENST00000339987 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
SDCBP2-201ENST00000339987 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
SDCBP2-201ENST00000339987 PRM1P04553 51 aa3.77□□□□□ -1.81
SDCBP2-201ENST00000339987 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
SDCBP2-201ENST00000339987 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
SDCBP2-201ENST00000339987 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
SDCBP2-201ENST00000339987 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
SDCBP2-201ENST00000339987 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
SDCBP2-201ENST00000339987 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
SDCBP2-201ENST00000339987 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
SDCBP2-201ENST00000339987 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
SDCBP2-201ENST00000339987 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 84.9 ms