RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 PRO2289Q9P1D8 64 aa2.89□□□□□ -1.95
SRFBP1-201ENST00000339397 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
SRFBP1-201ENST00000339397 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
SRFBP1-201ENST00000339397 FCGBPQ9Y6R7 5405 aaPredicted RBP2.85□□□□□ -1.95
SRFBP1-201ENST00000339397 KRTAP8-1Q8IUC2 63 aa2.84□□□□□ -1.96
SRFBP1-201ENST00000339397 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
SRFBP1-201ENST00000339397 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
SRFBP1-201ENST00000339397 KRTAP12-3P60328 96 aa2.81□□□□□ -1.96
SRFBP1-201ENST00000339397 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
SRFBP1-201ENST00000339397 KRTAP19-6Q3LI70 58 aa2.78□□□□□ -1.96
SRFBP1-201ENST00000339397 KRTAP4-11Q9BYQ6 195 aa2.78□□□□□ -1.97
SRFBP1-201ENST00000339397 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.97
SRFBP1-201ENST00000339397 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
SRFBP1-201ENST00000339397 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
SRFBP1-201ENST00000339397 KRTAP19-7Q3SYF9 63 aa2.73□□□□□ -1.97
SRFBP1-201ENST00000339397 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
SRFBP1-201ENST00000339397 MUC12Q9UKN1 5478 aa2.71□□□□□ -1.98
SRFBP1-201ENST00000339397 KRTAP6-3Q3LI67 103 aa2.7□□□□□ -1.98
SRFBP1-201ENST00000339397 NEBP20929 6669 aa2.68□□□□□ -1.98
SRFBP1-201ENST00000339397 MT1EP04732 61 aa2.64□□□□□ -1.99
SRFBP1-201ENST00000339397 DSTQ03001 7570 aaKnown RBP2.63□□□□□ -1.99
SRFBP1-201ENST00000339397 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
SRFBP1-201ENST00000339397 MT1LQ93083 61 aa2.61□□□□□ -1.99
SRFBP1-201ENST00000339397 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
SRFBP1-201ENST00000339397 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
SRFBP1-201ENST00000339397 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
SRFBP1-201ENST00000339397 MDN1Q9NU22 5596 aa2.56□□□□□ -2
SRFBP1-201ENST00000339397 SPRR2FQ96RM1 72 aa2.55□□□□□ -2
SRFBP1-201ENST00000339397 LCE1AQ5T7P2 110 aa2.52□□□□□ -2.01
SRFBP1-201ENST00000339397 KRTAP2-2Q9BYT5 123 aa2.51□□□□□ -2.01
SRFBP1-201ENST00000339397 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
SRFBP1-201ENST00000339397 INE1O15225 51 aa2.49□□□□□ -2.01
SRFBP1-201ENST00000339397 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
SRFBP1-201ENST00000339397 MT1MQ8N339 61 aa2.48□□□□□ -2.01
SRFBP1-201ENST00000339397 KRTAP2-3P0C7H8 128 aa2.47□□□□□ -2.01
SRFBP1-201ENST00000339397 KRTAP2-4Q9BYR9 128 aa2.47□□□□□ -2.01
SRFBP1-201ENST00000339397 MT1GP13640 62 aa2.47□□□□□ -2.01
SRFBP1-201ENST00000339397 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
SRFBP1-201ENST00000339397 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
SRFBP1-201ENST00000339397 SPRR2EP22531 72 aa2.38□□□□□ -2.03
SRFBP1-201ENST00000339397 SPRR2BP35325 72 aa2.38□□□□□ -2.03
SRFBP1-201ENST00000339397 SPRR2AP35326 72 aa2.38□□□□□ -2.03
SRFBP1-201ENST00000339397 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
SRFBP1-201ENST00000339397 SYNE1Q8NF91 8797 aaKnown RBP2.35□□□□□ -2.03
SRFBP1-201ENST00000339397 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
SRFBP1-201ENST00000339397 SPRR2DP22532 72 aa2.3□□□□□ -2.04
SRFBP1-201ENST00000339397 MT3P25713 68 aa2.28□□□□□ -2.05
SRFBP1-201ENST00000339397 KRTAP6-1Q3LI64 71 aa2.24□□□□□ -2.05
SRFBP1-201ENST00000339397 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
SRFBP1-201ENST00000339397 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
SRFBP1-201ENST00000339397 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
SRFBP1-201ENST00000339397 MT1AP04731 61 aa2.17□□□□□ -2.06
SRFBP1-201ENST00000339397 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
SRFBP1-201ENST00000339397 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
SRFBP1-201ENST00000339397 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
SRFBP1-201ENST00000339397 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
SRFBP1-201ENST00000339397 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
SRFBP1-201ENST00000339397 KRTAP6-2Q3LI66 62 aa2.04□□□□□ -2.08
SRFBP1-201ENST00000339397 MT4P47944 62 aa2.04□□□□□ -2.08
SRFBP1-201ENST00000339397 KRTAP5-4Q6L8H1 288 aa2.04□□□□□ -2.08
SRFBP1-201ENST00000339397 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
SRFBP1-201ENST00000339397 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
SRFBP1-201ENST00000339397 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
SRFBP1-201ENST00000339397 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
SRFBP1-201ENST00000339397 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
SRFBP1-201ENST00000339397 PRM1P04553 51 aa1.79□□□□□ -2.12
SRFBP1-201ENST00000339397 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
SRFBP1-201ENST00000339397 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
SRFBP1-201ENST00000339397 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
SRFBP1-201ENST00000339397 LCE1BQ5T7P3 118 aa1.66□□□□□ -2.14
SRFBP1-201ENST00000339397 KRTAP5-1Q6L8H4 278 aa1.65□□□□□ -2.15
SRFBP1-201ENST00000339397 LCE1CQ5T751 118 aa1.56□□□□□ -2.16
SRFBP1-201ENST00000339397 KRTAP4-4Q9BYR3 166 aa1.54□□□□□ -2.16
SRFBP1-201ENST00000339397 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
SRFBP1-201ENST00000339397 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
SRFBP1-201ENST00000339397 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
SRFBP1-201ENST00000339397 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 123.2 ms