RNA–Protein interactions for RNA: ENST00000338895.7

DFFB-201, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 2 BASIC

Gene DFFB, Length 3,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-201ENST00000338895 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
DFFB-201ENST00000338895 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.7
DFFB-201ENST00000338895 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
DFFB-201ENST00000338895 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
DFFB-201ENST00000338895 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
DFFB-201ENST00000338895 MT1GP13640 62 aa4.37□□□□□ -1.71
DFFB-201ENST00000338895 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
DFFB-201ENST00000338895 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
DFFB-201ENST00000338895 MDN1Q9NU22 5596 aa4.28□□□□□ -1.72
DFFB-201ENST00000338895 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
DFFB-201ENST00000338895 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
DFFB-201ENST00000338895 MT1MQ8N339 61 aa4.25□□□□□ -1.73
DFFB-201ENST00000338895 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
DFFB-201ENST00000338895 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
DFFB-201ENST00000338895 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
DFFB-201ENST00000338895 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
DFFB-201ENST00000338895 LCE5AQ5TCM9 118 aa4.08□□□□□ -1.76
DFFB-201ENST00000338895 KRTAP9-2Q9BYQ4 174 aa4.07□□□□□ -1.76
DFFB-201ENST00000338895 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
DFFB-201ENST00000338895 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
DFFB-201ENST00000338895 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
DFFB-201ENST00000338895 SPRR2EP22531 72 aa3.92□□□□□ -1.78
DFFB-201ENST00000338895 SPRR2BP35325 72 aa3.92□□□□□ -1.78
DFFB-201ENST00000338895 SPRR2AP35326 72 aa3.92□□□□□ -1.78
DFFB-201ENST00000338895 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
DFFB-201ENST00000338895 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
DFFB-201ENST00000338895 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
DFFB-201ENST00000338895 MT1AP04731 61 aa3.74□□□□□ -1.81
DFFB-201ENST00000338895 SPRR2DP22532 72 aa3.73□□□□□ -1.81
DFFB-201ENST00000338895 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.82
DFFB-201ENST00000338895 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
DFFB-201ENST00000338895 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
DFFB-201ENST00000338895 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
DFFB-201ENST00000338895 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
DFFB-201ENST00000338895 KRTAP9-7A8MTY7 169 aa3.56□□□□□ -1.84
DFFB-201ENST00000338895 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
DFFB-201ENST00000338895 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
DFFB-201ENST00000338895 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
DFFB-201ENST00000338895 KRTAP9-6A0A140TA67 174 aa3.49□□□□□ -1.85
DFFB-201ENST00000338895 PRM1P04553 51 aa3.48□□□□□ -1.85
DFFB-201ENST00000338895 MT4P47944 62 aa3.43□□□□□ -1.86
DFFB-201ENST00000338895 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
DFFB-201ENST00000338895 MT3P25713 68 aa3.41□□□□□ -1.86
DFFB-201ENST00000338895 NEBP20929 6669 aa3.39□□□□□ -1.87
DFFB-201ENST00000338895 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
DFFB-201ENST00000338895 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
DFFB-201ENST00000338895 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
DFFB-201ENST00000338895 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
DFFB-201ENST00000338895 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
DFFB-201ENST00000338895 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
DFFB-201ENST00000338895 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
DFFB-201ENST00000338895 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
DFFB-201ENST00000338895 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
DFFB-201ENST00000338895 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
DFFB-201ENST00000338895 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
DFFB-201ENST00000338895 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
DFFB-201ENST00000338895 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
DFFB-201ENST00000338895 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
DFFB-201ENST00000338895 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
DFFB-201ENST00000338895 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
DFFB-201ENST00000338895 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
DFFB-201ENST00000338895 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
DFFB-201ENST00000338895 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
DFFB-201ENST00000338895 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
DFFB-201ENST00000338895 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
DFFB-201ENST00000338895 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
DFFB-201ENST00000338895 LCE1CQ5T751 118 aa2.55□□□□□ -2
DFFB-201ENST00000338895 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
DFFB-201ENST00000338895 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
DFFB-201ENST00000338895 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
DFFB-201ENST00000338895 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
DFFB-201ENST00000338895 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
DFFB-201ENST00000338895 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
DFFB-201ENST00000338895 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
DFFB-201ENST00000338895 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
DFFB-201ENST00000338895 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
DFFB-201ENST00000338895 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 52.9 ms