RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 MUC12Q9UKN1 5478 aa9.1□□□□□ -0.95
ATF4-201ENST00000337304 KRTAP19-4Q3LI73 84 aa9.1□□□□□ -0.95
ATF4-201ENST00000337304 SYNE2Q8WXH0 6885 aaKnown RBP9.09□□□□□ -0.95
ATF4-201ENST00000337304 KRTAP5-9P26371 169 aa9.04□□□□□ -0.96
ATF4-201ENST00000337304 KRTAP19-3Q7Z4W3 81 aa9.03□□□□□ -0.96
ATF4-201ENST00000337304 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.02□□□□□ -0.97
ATF4-201ENST00000337304 KRTAP4-7Q9BYR0 210 aa9.02□□□□□ -0.97
ATF4-201ENST00000337304 MT1GP13640 62 aa8.94□□□□□ -0.98
ATF4-201ENST00000337304 LCE5AQ5TCM9 118 aa8.87□□□□□ -0.99
ATF4-201ENST00000337304 MT1MQ8N339 61 aa8.87□□□□□ -0.99
ATF4-201ENST00000337304 KRTAP6-3Q3LI67 103 aa8.83□□□□□ -1
ATF4-201ENST00000337304 LCE1AQ5T7P2 110 aa8.77□□□□□ -1.01
ATF4-201ENST00000337304 INE1O15225 51 aa8.75□□□□□ -1.01
ATF4-201ENST00000337304 KRTAP4-3Q9BYR4 195 aa8.75□□□□□ -1.01
ATF4-201ENST00000337304 KRTAP9-6A8MVA2 160 aa8.73□□□□□ -1.01
ATF4-201ENST00000337304 MDN1Q9NU22 5596 aa8.73□□□□□ -1.01
ATF4-201ENST00000337304 SPRR2EP22531 72 aa8.68□□□□□ -1.02
ATF4-201ENST00000337304 SPRR2BP35325 72 aa8.68□□□□□ -1.02
ATF4-201ENST00000337304 SPRR2AP35326 72 aa8.68□□□□□ -1.02
ATF4-201ENST00000337304 KRTAP9-7A8MTY7 169 aa8.48□□□□□ -1.05
ATF4-201ENST00000337304 LOC100996750A0A140TA64 210 aa8.46□□□□□ -1.05
ATF4-201ENST00000337304 DSTQ03001 7570 aaKnown RBP8.4□□□□□ -1.06
ATF4-201ENST00000337304 SPRR2DP22532 72 aa8.36□□□□□ -1.07
ATF4-201ENST00000337304 NEBP20929 6669 aa8.19□□□□□ -1.1
ATF4-201ENST00000337304 KRTAP2-3P0C7H8 128 aa8.06□□□□□ -1.12
ATF4-201ENST00000337304 KRTAP2-4Q9BYR9 128 aa8.06□□□□□ -1.12
ATF4-201ENST00000337304 KRTAP2-1Q9BYU5 128 aa8.06□□□□□ -1.12
ATF4-201ENST00000337304 LCE3BQ5TA77 95 aa8.02□□□□□ -1.13
ATF4-201ENST00000337304 KRTAP5-5Q701N2 237 aaPredicted RBP7.99□□□□□ -1.13
ATF4-201ENST00000337304 MT1AP04731 61 aa7.84□□□□□ -1.15
ATF4-201ENST00000337304 KRTAP6-1Q3LI64 71 aa7.81□□□□□ -1.16
ATF4-201ENST00000337304 KRTAP5-4Q6L8H1 288 aa7.58□□□□□ -1.2
ATF4-201ENST00000337304 SYNE1Q8NF91 8797 aaKnown RBP7.57□□□□□ -1.2
ATF4-201ENST00000337304 KRTAP2-2Q9BYT5 123 aa7.54□□□□□ -1.2
ATF4-201ENST00000337304 KRTAP20-1Q3LI63 56 aa7.52□□□□□ -1.21
ATF4-201ENST00000337304 KRTAP9-4Q9BYQ2 154 aa7.45□□□□□ -1.22
ATF4-201ENST00000337304 LCE4AQ5TA78 99 aa7.39□□□□□ -1.23
ATF4-201ENST00000337304 KRTAP12-4P60329 112 aa7.36□□□□□ -1.23
ATF4-201ENST00000337304 MT4P47944 62 aa7.27□□□□□ -1.25
ATF4-201ENST00000337304 KRTAP4-6Q9BYQ5 205 aa7.25□□□□□ -1.25
ATF4-201ENST00000337304 KRTAP4-9Q9BYQ8 210 aa7.21□□□□□ -1.26
ATF4-201ENST00000337304 KRTAP6-2Q3LI66 62 aa7.17□□□□□ -1.26
ATF4-201ENST00000337304 LCE1DQ5T752 114 aa7.13□□□□□ -1.27
ATF4-201ENST00000337304 MT3P25713 68 aa7.09□□□□□ -1.27
ATF4-201ENST00000337304 KRTAP20-2Q3LI61 65 aa7.09□□□□□ -1.27
ATF4-201ENST00000337304 HMCN1Q96RW7 5635 aa7.01□□□□□ -1.29
ATF4-201ENST00000337304 KRTAP5-2Q701N4 177 aa6.89□□□□□ -1.31
ATF4-201ENST00000337304 LCE3DQ9BYE3 92 aa6.89□□□□□ -1.31
ATF4-201ENST00000337304 KRTAP5-3Q6L8H2 238 aa6.83□□□□□ -1.32
ATF4-201ENST00000337304 LCE3EQ5T5B0 92 aa6.71□□□□□ -1.34
ATF4-201ENST00000337304 OBSCNQ5VST9 7968 aa6.55□□□□□ -1.36
ATF4-201ENST00000337304 AHNAK2Q8IVF2 5795 aa6.16□□□□□ -1.42
ATF4-201ENST00000337304 LCE1EQ5T753 118 aa6.13□□□□□ -1.43
ATF4-201ENST00000337304 KRTAP4-11Q9BYQ6 195 aa6.12□□□□□ -1.43
ATF4-201ENST00000337304 KRTAP5-1Q6L8H4 278 aa5.96□□□□□ -1.46
ATF4-201ENST00000337304 PRM1P04553 51 aa5.94□□□□□ -1.46
ATF4-201ENST00000337304 KRTAP5-8O75690 187 aa5.9□□□□□ -1.47
ATF4-201ENST00000337304 GPR98Q8WXG9 6306 aa5.86□□□□□ -1.47
ATF4-201ENST00000337304 KRTAP5-10Q6L8G5 202 aa5.85□□□□□ -1.47
ATF4-201ENST00000337304 LCE1BQ5T7P3 118 aa5.79□□□□□ -1.48
ATF4-201ENST00000337304 KRTAP4-2Q9BYR5 136 aa5.75□□□□□ -1.49
ATF4-201ENST00000337304 MUC5ACP98088 5654 aa5.75□□□□□ -1.49
ATF4-201ENST00000337304 LCE1CQ5T751 118 aa5.72□□□□□ -1.49
ATF4-201ENST00000337304 KRTAP5-7Q6L8G8 165 aa5.71□□□□□ -1.5
ATF4-201ENST00000337304 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.36□□□□□ -1.55
ATF4-201ENST00000337304 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
ATF4-201ENST00000337304 KRTAP21-2Q3LI59 83 aa5.11□□□□□ -1.59
ATF4-201ENST00000337304 KRTAP5-11Q6L8G4 156 aa5.04□□□□□ -1.6
ATF4-201ENST00000337304 MUC5BQ9HC84 5762 aaPredicted RBP5.01□□□□□ -1.61
ATF4-201ENST00000337304 KRTAP4-12Q9BQ66 201 aa4.78□□□□□ -1.64
ATF4-201ENST00000337304 AHNAKQ09666 5890 aaKnown RBP4.67□□□□□ -1.66
ATF4-201ENST00000337304 KRTAP4-4Q9BYR3 166 aa4.56□□□□□ -1.68
ATF4-201ENST00000337304 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
ATF4-201ENST00000337304 PHGR1C9JFL3 82 aa4.34□□□□□ -1.71
ATF4-201ENST00000337304 KRTAP21-1Q3LI58 79 aa3.92□□□□□ -1.78
ATF4-201ENST00000337304 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.78
ATF4-201ENST00000337304 MUC16Q8WXI7 14507 aa2.82□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms