RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 KRTAP19-6Q3LI70 58 aa4.97□□□□□ -1.61
HDAC5-202ENST00000336057 MT1MQ8N339 61 aa4.97□□□□□ -1.61
HDAC5-202ENST00000336057 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
HDAC5-202ENST00000336057 LCE2AQ5TA79 106 aaPredicted RBP4.92□□□□□ -1.62
HDAC5-202ENST00000336057 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
HDAC5-202ENST00000336057 MUC2Q02817 5179 aa4.87□□□□□ -1.63
HDAC5-202ENST00000336057 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
HDAC5-202ENST00000336057 FSIP2Q5CZC0 6907 aa4.85□□□□□ -1.63
HDAC5-202ENST00000336057 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
HDAC5-202ENST00000336057 KRTAP2-3P0C7H8 128 aa4.77□□□□□ -1.65
HDAC5-202ENST00000336057 KRTAP2-4Q9BYR9 128 aa4.77□□□□□ -1.65
HDAC5-202ENST00000336057 KRTAP2-1Q9BYU5 128 aa4.77□□□□□ -1.65
HDAC5-202ENST00000336057 MT3P25713 68 aa4.67□□□□□ -1.66
HDAC5-202ENST00000336057 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
HDAC5-202ENST00000336057 LCE2DQ5TA82 110 aaPredicted RBP4.64□□□□□ -1.67
HDAC5-202ENST00000336057 PRM1P04553 51 aa4.62□□□□□ -1.67
HDAC5-202ENST00000336057 MT1AP04731 61 aa4.6□□□□□ -1.67
HDAC5-202ENST00000336057 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.68
HDAC5-202ENST00000336057 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
HDAC5-202ENST00000336057 MT4P47944 62 aa4.46□□□□□ -1.7
HDAC5-202ENST00000336057 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
HDAC5-202ENST00000336057 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
HDAC5-202ENST00000336057 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
HDAC5-202ENST00000336057 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
HDAC5-202ENST00000336057 USH2AO75445 5202 aa4.35□□□□□ -1.71
HDAC5-202ENST00000336057 KRTAP9-6A0A140TA67 174 aa4.33□□□□□ -1.72
HDAC5-202ENST00000336057 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
HDAC5-202ENST00000336057 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
HDAC5-202ENST00000336057 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
HDAC5-202ENST00000336057 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
HDAC5-202ENST00000336057 KMT2DO14686 5537 aa4.26□□□□□ -1.73
HDAC5-202ENST00000336057 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
HDAC5-202ENST00000336057 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
HDAC5-202ENST00000336057 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
HDAC5-202ENST00000336057 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
HDAC5-202ENST00000336057 KRTAP9-7A8MTY7 169 aa4.1□□□□□ -1.75
HDAC5-202ENST00000336057 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
HDAC5-202ENST00000336057 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.01□□□□□ -1.77
HDAC5-202ENST00000336057 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
HDAC5-202ENST00000336057 MUC12Q9UKN1 5478 aa3.95□□□□□ -1.78
HDAC5-202ENST00000336057 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
HDAC5-202ENST00000336057 MACF1Q9UPN3 7388 aaKnown RBP3.93□□□□□ -1.78
HDAC5-202ENST00000336057 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
HDAC5-202ENST00000336057 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
HDAC5-202ENST00000336057 KRTAP4-6Q9BYQ5 205 aa3.57□□□□□ -1.84
HDAC5-202ENST00000336057 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
HDAC5-202ENST00000336057 NEBP20929 6669 aa3.56□□□□□ -1.84
HDAC5-202ENST00000336057 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
HDAC5-202ENST00000336057 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
HDAC5-202ENST00000336057 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
HDAC5-202ENST00000336057 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
HDAC5-202ENST00000336057 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
HDAC5-202ENST00000336057 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
HDAC5-202ENST00000336057 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
HDAC5-202ENST00000336057 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
HDAC5-202ENST00000336057 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
HDAC5-202ENST00000336057 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
HDAC5-202ENST00000336057 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
HDAC5-202ENST00000336057 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
HDAC5-202ENST00000336057 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
HDAC5-202ENST00000336057 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
HDAC5-202ENST00000336057 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
HDAC5-202ENST00000336057 KRTAP5-3Q6L8H2 238 aa2.83□□□□□ -1.96
HDAC5-202ENST00000336057 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
HDAC5-202ENST00000336057 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
HDAC5-202ENST00000336057 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
HDAC5-202ENST00000336057 KRTAP5-8O75690 187 aa2.58□□□□□ -2
HDAC5-202ENST00000336057 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
HDAC5-202ENST00000336057 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
HDAC5-202ENST00000336057 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.03
HDAC5-202ENST00000336057 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
HDAC5-202ENST00000336057 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
HDAC5-202ENST00000336057 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
HDAC5-202ENST00000336057 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
HDAC5-202ENST00000336057 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
HDAC5-202ENST00000336057 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
HDAC5-202ENST00000336057 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 59.6 ms