RNA–Protein interactions for RNA: ENST00000335509.10

TPCN1-201, Transcript of two pore segment channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPCN1, Length 5,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-201ENST00000335509 MUC2Q02817 5179 aa5.1□□□□□ -1.59
TPCN1-201ENST00000335509 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
TPCN1-201ENST00000335509 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
TPCN1-201ENST00000335509 MT1MQ8N339 61 aa5□□□□□ -1.61
TPCN1-201ENST00000335509 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
TPCN1-201ENST00000335509 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
TPCN1-201ENST00000335509 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
TPCN1-201ENST00000335509 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
TPCN1-201ENST00000335509 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
TPCN1-201ENST00000335509 LCE2DQ5TA82 110 aaPredicted RBP4.87□□□□□ -1.63
TPCN1-201ENST00000335509 MT3P25713 68 aa4.83□□□□□ -1.64
TPCN1-201ENST00000335509 FCGBPQ9Y6R7 5405 aaPredicted RBP4.82□□□□□ -1.64
TPCN1-201ENST00000335509 PRM1P04553 51 aa4.79□□□□□ -1.64
TPCN1-201ENST00000335509 LCE2AQ5TA79 106 aaPredicted RBP4.78□□□□□ -1.64
TPCN1-201ENST00000335509 MT4P47944 62 aa4.77□□□□□ -1.65
TPCN1-201ENST00000335509 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
TPCN1-201ENST00000335509 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
TPCN1-201ENST00000335509 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.66
TPCN1-201ENST00000335509 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
TPCN1-201ENST00000335509 USH2AO75445 5202 aa4.64□□□□□ -1.67
TPCN1-201ENST00000335509 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
TPCN1-201ENST00000335509 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
TPCN1-201ENST00000335509 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
TPCN1-201ENST00000335509 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
TPCN1-201ENST00000335509 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
TPCN1-201ENST00000335509 MT1AP04731 61 aa4.61□□□□□ -1.67
TPCN1-201ENST00000335509 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
TPCN1-201ENST00000335509 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
TPCN1-201ENST00000335509 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
TPCN1-201ENST00000335509 KMT2DO14686 5537 aa4.4□□□□□ -1.7
TPCN1-201ENST00000335509 MUC19Q7Z5P9 8384 aa4.35□□□□□ -1.71
TPCN1-201ENST00000335509 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
TPCN1-201ENST00000335509 KRTAP9-6A0A140TA67 174 aa4.33□□□□□ -1.72
TPCN1-201ENST00000335509 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
TPCN1-201ENST00000335509 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
TPCN1-201ENST00000335509 KRTAP9-4Q9BYQ2 154 aa4.21□□□□□ -1.74
TPCN1-201ENST00000335509 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
TPCN1-201ENST00000335509 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
TPCN1-201ENST00000335509 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.75
TPCN1-201ENST00000335509 MDN1Q9NU22 5596 aa4.11□□□□□ -1.75
TPCN1-201ENST00000335509 KRTAP20-1Q3LI63 56 aa4.1□□□□□ -1.75
TPCN1-201ENST00000335509 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
TPCN1-201ENST00000335509 LCE4AQ5TA78 99 aa4□□□□□ -1.77
TPCN1-201ENST00000335509 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
TPCN1-201ENST00000335509 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
TPCN1-201ENST00000335509 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
TPCN1-201ENST00000335509 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
TPCN1-201ENST00000335509 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
TPCN1-201ENST00000335509 NEBP20929 6669 aa3.74□□□□□ -1.81
TPCN1-201ENST00000335509 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
TPCN1-201ENST00000335509 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
TPCN1-201ENST00000335509 KRTAP4-6Q9BYQ5 205 aa3.64□□□□□ -1.83
TPCN1-201ENST00000335509 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.84
TPCN1-201ENST00000335509 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
TPCN1-201ENST00000335509 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.85
TPCN1-201ENST00000335509 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
TPCN1-201ENST00000335509 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
TPCN1-201ENST00000335509 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
TPCN1-201ENST00000335509 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
TPCN1-201ENST00000335509 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
TPCN1-201ENST00000335509 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
TPCN1-201ENST00000335509 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
TPCN1-201ENST00000335509 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
TPCN1-201ENST00000335509 KRTAP5-3Q6L8H2 238 aa2.83□□□□□ -1.96
TPCN1-201ENST00000335509 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
TPCN1-201ENST00000335509 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
TPCN1-201ENST00000335509 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
TPCN1-201ENST00000335509 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
TPCN1-201ENST00000335509 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
TPCN1-201ENST00000335509 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
TPCN1-201ENST00000335509 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
TPCN1-201ENST00000335509 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
TPCN1-201ENST00000335509 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
TPCN1-201ENST00000335509 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
TPCN1-201ENST00000335509 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
TPCN1-201ENST00000335509 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.09
TPCN1-201ENST00000335509 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms