RNA–Protein interactions for RNA: ENST00000335464.9

TMEM104-201, Transcript of transmembrane protein 104, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM104, Length 4,745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104-201ENST00000335464 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
TMEM104-201ENST00000335464 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
TMEM104-201ENST00000335464 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
TMEM104-201ENST00000335464 LCE2AQ5TA79 106 aaPredicted RBP4.47□□□□□ -1.69
TMEM104-201ENST00000335464 MT1MQ8N339 61 aa4.47□□□□□ -1.69
TMEM104-201ENST00000335464 FSIP2Q5CZC0 6907 aa4.4□□□□□ -1.71
TMEM104-201ENST00000335464 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.71
TMEM104-201ENST00000335464 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
TMEM104-201ENST00000335464 KMT2DO14686 5537 aa4.39□□□□□ -1.71
TMEM104-201ENST00000335464 SPRR2EP22531 72 aa4.39□□□□□ -1.71
TMEM104-201ENST00000335464 SPRR2BP35325 72 aa4.39□□□□□ -1.71
TMEM104-201ENST00000335464 SPRR2AP35326 72 aa4.39□□□□□ -1.71
TMEM104-201ENST00000335464 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
TMEM104-201ENST00000335464 USH2AO75445 5202 aa4.32□□□□□ -1.72
TMEM104-201ENST00000335464 SPRR2DP22532 72 aa4.24□□□□□ -1.73
TMEM104-201ENST00000335464 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
TMEM104-201ENST00000335464 PRM1P04553 51 aa4.17□□□□□ -1.74
TMEM104-201ENST00000335464 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
TMEM104-201ENST00000335464 LCE2DQ5TA82 110 aaPredicted RBP4.12□□□□□ -1.75
TMEM104-201ENST00000335464 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
TMEM104-201ENST00000335464 MT1AP04731 61 aa4.09□□□□□ -1.75
TMEM104-201ENST00000335464 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
TMEM104-201ENST00000335464 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
TMEM104-201ENST00000335464 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
TMEM104-201ENST00000335464 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
TMEM104-201ENST00000335464 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
TMEM104-201ENST00000335464 MT3P25713 68 aa3.96□□□□□ -1.78
TMEM104-201ENST00000335464 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
TMEM104-201ENST00000335464 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
TMEM104-201ENST00000335464 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.79
TMEM104-201ENST00000335464 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
TMEM104-201ENST00000335464 MT4P47944 62 aa3.83□□□□□ -1.8
TMEM104-201ENST00000335464 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
TMEM104-201ENST00000335464 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
TMEM104-201ENST00000335464 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.81
TMEM104-201ENST00000335464 MACF1Q9UPN3 7388 aaKnown RBP3.7□□□□□ -1.82
TMEM104-201ENST00000335464 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
TMEM104-201ENST00000335464 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
TMEM104-201ENST00000335464 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
TMEM104-201ENST00000335464 KRTAP6-3Q3LI67 103 aa3.49□□□□□ -1.85
TMEM104-201ENST00000335464 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
TMEM104-201ENST00000335464 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
TMEM104-201ENST00000335464 KRTAP5-9P26371 169 aa3.46□□□□□ -1.85
TMEM104-201ENST00000335464 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
TMEM104-201ENST00000335464 MDN1Q9NU22 5596 aa3.33□□□□□ -1.88
TMEM104-201ENST00000335464 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
TMEM104-201ENST00000335464 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
TMEM104-201ENST00000335464 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
TMEM104-201ENST00000335464 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
TMEM104-201ENST00000335464 NEBP20929 6669 aa3.16□□□□□ -1.9
TMEM104-201ENST00000335464 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
TMEM104-201ENST00000335464 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
TMEM104-201ENST00000335464 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
TMEM104-201ENST00000335464 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
TMEM104-201ENST00000335464 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
TMEM104-201ENST00000335464 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
TMEM104-201ENST00000335464 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
TMEM104-201ENST00000335464 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
TMEM104-201ENST00000335464 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
TMEM104-201ENST00000335464 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
TMEM104-201ENST00000335464 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
TMEM104-201ENST00000335464 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
TMEM104-201ENST00000335464 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -2
TMEM104-201ENST00000335464 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
TMEM104-201ENST00000335464 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
TMEM104-201ENST00000335464 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
TMEM104-201ENST00000335464 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
TMEM104-201ENST00000335464 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
TMEM104-201ENST00000335464 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
TMEM104-201ENST00000335464 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
TMEM104-201ENST00000335464 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
TMEM104-201ENST00000335464 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
TMEM104-201ENST00000335464 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
TMEM104-201ENST00000335464 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
TMEM104-201ENST00000335464 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
TMEM104-201ENST00000335464 PHGR1C9JFL3 82 aa1.9□□□□□ -2.1
TMEM104-201ENST00000335464 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 84.9 ms