RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 MT1LQ93083 61 aa4.78□□□□□ -1.64
SF1-202ENST00000334944 KRTAP19-6Q3LI70 58 aa4.78□□□□□ -1.64
SF1-202ENST00000334944 KRTAP2-3P0C7H8 128 aa4.76□□□□□ -1.65
SF1-202ENST00000334944 KRTAP2-4Q9BYR9 128 aa4.76□□□□□ -1.65
SF1-202ENST00000334944 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
SF1-202ENST00000334944 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
SF1-202ENST00000334944 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
SF1-202ENST00000334944 LOC100996750A0A140TA64 210 aa4.64□□□□□ -1.67
SF1-202ENST00000334944 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
SF1-202ENST00000334944 MT1GP13640 62 aa4.56□□□□□ -1.68
SF1-202ENST00000334944 SYNE2Q8WXH0 6885 aaKnown RBP4.54□□□□□ -1.68
SF1-202ENST00000334944 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
SF1-202ENST00000334944 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
SF1-202ENST00000334944 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
SF1-202ENST00000334944 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
SF1-202ENST00000334944 MT1MQ8N339 61 aa4.5□□□□□ -1.69
SF1-202ENST00000334944 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
SF1-202ENST00000334944 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
SF1-202ENST00000334944 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
SF1-202ENST00000334944 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.71
SF1-202ENST00000334944 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
SF1-202ENST00000334944 LCE5AQ5TCM9 118 aa4.35□□□□□ -1.71
SF1-202ENST00000334944 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
SF1-202ENST00000334944 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
SF1-202ENST00000334944 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
SF1-202ENST00000334944 LCE3BQ5TA77 95 aa4.21□□□□□ -1.74
SF1-202ENST00000334944 KRTAP5-9P26371 169 aa4.15□□□□□ -1.74
SF1-202ENST00000334944 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.75
SF1-202ENST00000334944 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
SF1-202ENST00000334944 SPRR2EP22531 72 aa4.1□□□□□ -1.75
SF1-202ENST00000334944 SPRR2BP35325 72 aa4.1□□□□□ -1.75
SF1-202ENST00000334944 SPRR2AP35326 72 aa4.1□□□□□ -1.75
SF1-202ENST00000334944 PRM1P04553 51 aa4.09□□□□□ -1.75
SF1-202ENST00000334944 NEBP20929 6669 aa4.03□□□□□ -1.76
SF1-202ENST00000334944 MT1AP04731 61 aa3.96□□□□□ -1.77
SF1-202ENST00000334944 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.77
SF1-202ENST00000334944 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
SF1-202ENST00000334944 SPRR2DP22532 72 aa3.91□□□□□ -1.78
SF1-202ENST00000334944 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
SF1-202ENST00000334944 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
SF1-202ENST00000334944 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
SF1-202ENST00000334944 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
SF1-202ENST00000334944 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
SF1-202ENST00000334944 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
SF1-202ENST00000334944 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
SF1-202ENST00000334944 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
SF1-202ENST00000334944 MT3P25713 68 aa3.57□□□□□ -1.84
SF1-202ENST00000334944 MT4P47944 62 aa3.56□□□□□ -1.84
SF1-202ENST00000334944 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
SF1-202ENST00000334944 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
SF1-202ENST00000334944 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
SF1-202ENST00000334944 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
SF1-202ENST00000334944 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
SF1-202ENST00000334944 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
SF1-202ENST00000334944 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
SF1-202ENST00000334944 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
SF1-202ENST00000334944 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
SF1-202ENST00000334944 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
SF1-202ENST00000334944 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
SF1-202ENST00000334944 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
SF1-202ENST00000334944 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
SF1-202ENST00000334944 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.91
SF1-202ENST00000334944 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
SF1-202ENST00000334944 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
SF1-202ENST00000334944 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
SF1-202ENST00000334944 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
SF1-202ENST00000334944 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
SF1-202ENST00000334944 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
SF1-202ENST00000334944 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
SF1-202ENST00000334944 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
SF1-202ENST00000334944 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
SF1-202ENST00000334944 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
SF1-202ENST00000334944 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
SF1-202ENST00000334944 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
SF1-202ENST00000334944 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
SF1-202ENST00000334944 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
SF1-202ENST00000334944 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 62.4 ms