RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 SPRR2EP22531 72 aa6.4□□□□□ -1.39
CHGA-202ENST00000334654 SPRR2BP35325 72 aa6.4□□□□□ -1.39
CHGA-202ENST00000334654 SPRR2AP35326 72 aa6.4□□□□□ -1.39
CHGA-202ENST00000334654 KRTAP12-3P60328 96 aa6.34□□□□□ -1.4
CHGA-202ENST00000334654 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
CHGA-202ENST00000334654 MT1LQ93083 61 aa6.27□□□□□ -1.41
CHGA-202ENST00000334654 LCE5AQ5TCM9 118 aa6.26□□□□□ -1.41
CHGA-202ENST00000334654 MT1GP13640 62 aa6.19□□□□□ -1.42
CHGA-202ENST00000334654 SPRR2DP22532 72 aa6.17□□□□□ -1.42
CHGA-202ENST00000334654 MT1MQ8N339 61 aa6.11□□□□□ -1.43
CHGA-202ENST00000334654 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
CHGA-202ENST00000334654 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
CHGA-202ENST00000334654 KRTAP20-1Q3LI63 56 aa6.06□□□□□ -1.44
CHGA-202ENST00000334654 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
CHGA-202ENST00000334654 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
CHGA-202ENST00000334654 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
CHGA-202ENST00000334654 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
CHGA-202ENST00000334654 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
CHGA-202ENST00000334654 DSTQ03001 7570 aaKnown RBP5.96□□□□□ -1.45
CHGA-202ENST00000334654 LCE3CQ5T5A8 94 aa5.9□□□□□ -1.46
CHGA-202ENST00000334654 KRTAP2-2Q9BYT5 123 aa5.89□□□□□ -1.47
CHGA-202ENST00000334654 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
CHGA-202ENST00000334654 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
CHGA-202ENST00000334654 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
CHGA-202ENST00000334654 LUZP6Q538Z0 58 aa5.66□□□□□ -1.5
CHGA-202ENST00000334654 KRTAP9-6A8MVA2 160 aa5.63□□□□□ -1.51
CHGA-202ENST00000334654 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
CHGA-202ENST00000334654 KRTAP5-4Q6L8H1 288 aa5.55□□□□□ -1.52
CHGA-202ENST00000334654 LCE4AQ5TA78 99 aa5.5□□□□□ -1.53
CHGA-202ENST00000334654 H3BS24 57 aa5.45□□□□□ -1.54
CHGA-202ENST00000334654 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
CHGA-202ENST00000334654 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
CHGA-202ENST00000334654 MT4P47944 62 aa5.37□□□□□ -1.55
CHGA-202ENST00000334654 NDUFAF8A1L188 74 aa5.35□□□□□ -1.55
CHGA-202ENST00000334654 MT1AP04731 61 aa5.32□□□□□ -1.56
CHGA-202ENST00000334654 KRTAP4-6Q9BYQ5 205 aa5.32□□□□□ -1.56
CHGA-202ENST00000334654 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
CHGA-202ENST00000334654 KRTAP6-1Q3LI64 71 aa5.29□□□□□ -1.56
CHGA-202ENST00000334654 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
CHGA-202ENST00000334654 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
CHGA-202ENST00000334654 KRTAP20-2Q3LI61 65 aa5.19□□□□□ -1.58
CHGA-202ENST00000334654 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
CHGA-202ENST00000334654 KRTAP5-3Q6L8H2 238 aa5.04□□□□□ -1.6
CHGA-202ENST00000334654 AHNAK2Q8IVF2 5795 aa5□□□□□ -1.61
CHGA-202ENST00000334654 KRTAP5-2Q701N4 177 aa4.95□□□□□ -1.62
CHGA-202ENST00000334654 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
CHGA-202ENST00000334654 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
CHGA-202ENST00000334654 A0A0A0MQY5 61 aa4.85□□□□□ -1.63
CHGA-202ENST00000334654 MT3P25713 68 aa4.82□□□□□ -1.64
CHGA-202ENST00000334654 KRTAP5-10Q6L8G5 202 aa4.75□□□□□ -1.65
CHGA-202ENST00000334654 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
CHGA-202ENST00000334654 INE1O15225 51 aa4.59□□□□□ -1.67
CHGA-202ENST00000334654 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
CHGA-202ENST00000334654 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
CHGA-202ENST00000334654 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
CHGA-202ENST00000334654 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
CHGA-202ENST00000334654 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
CHGA-202ENST00000334654 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
CHGA-202ENST00000334654 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
CHGA-202ENST00000334654 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
CHGA-202ENST00000334654 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
CHGA-202ENST00000334654 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
CHGA-202ENST00000334654 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
CHGA-202ENST00000334654 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
CHGA-202ENST00000334654 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
CHGA-202ENST00000334654 AHNAKQ09666 5890 aaKnown RBP4□□□□□ -1.77
CHGA-202ENST00000334654 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
CHGA-202ENST00000334654 PRM1P04553 51 aa3.6□□□□□ -1.83
CHGA-202ENST00000334654 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.84
CHGA-202ENST00000334654 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
CHGA-202ENST00000334654 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
CHGA-202ENST00000334654 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
CHGA-202ENST00000334654 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
CHGA-202ENST00000334654 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
CHGA-202ENST00000334654 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
CHGA-202ENST00000334654 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
CHGA-202ENST00000334654 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 89.4 ms