RNA–Protein interactions for RNA: ENST00000331923.8

PAXBP1-202, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAXBP1, Length 3,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-202ENST00000331923 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
PAXBP1-202ENST00000331923 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
PAXBP1-202ENST00000331923 MT1EP04732 61 aa5.22□□□□□ -1.57
PAXBP1-202ENST00000331923 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
PAXBP1-202ENST00000331923 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
PAXBP1-202ENST00000331923 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.6
PAXBP1-202ENST00000331923 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.6
PAXBP1-202ENST00000331923 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
PAXBP1-202ENST00000331923 LCE2AQ5TA79 106 aaPredicted RBP5.02□□□□□ -1.61
PAXBP1-202ENST00000331923 MUC12Q9UKN1 5478 aa5.02□□□□□ -1.61
PAXBP1-202ENST00000331923 MT1MQ8N339 61 aa4.97□□□□□ -1.61
PAXBP1-202ENST00000331923 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
PAXBP1-202ENST00000331923 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
PAXBP1-202ENST00000331923 KRTAP2-3P0C7H8 128 aa4.92□□□□□ -1.62
PAXBP1-202ENST00000331923 KRTAP2-4Q9BYR9 128 aa4.92□□□□□ -1.62
PAXBP1-202ENST00000331923 KRTAP2-1Q9BYU5 128 aa4.92□□□□□ -1.62
PAXBP1-202ENST00000331923 SPRR2EP22531 72 aa4.9□□□□□ -1.63
PAXBP1-202ENST00000331923 SPRR2BP35325 72 aa4.9□□□□□ -1.63
PAXBP1-202ENST00000331923 SPRR2AP35326 72 aa4.9□□□□□ -1.63
PAXBP1-202ENST00000331923 SSPOA2VEC9 5147 aa4.86□□□□□ -1.63
PAXBP1-202ENST00000331923 LCE3EQ5T5B0 92 aa4.83□□□□□ -1.64
PAXBP1-202ENST00000331923 KRTAP19-6Q3LI70 58 aa4.82□□□□□ -1.64
PAXBP1-202ENST00000331923 PRM1P04553 51 aa4.7□□□□□ -1.66
PAXBP1-202ENST00000331923 SPRR2DP22532 72 aa4.67□□□□□ -1.66
PAXBP1-202ENST00000331923 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
PAXBP1-202ENST00000331923 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
PAXBP1-202ENST00000331923 MT1AP04731 61 aa4.46□□□□□ -1.69
PAXBP1-202ENST00000331923 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.69
PAXBP1-202ENST00000331923 KRTAP9-7A8MTY7 169 aa4.46□□□□□ -1.7
PAXBP1-202ENST00000331923 MDN1Q9NU22 5596 aa4.42□□□□□ -1.7
PAXBP1-202ENST00000331923 KRTAP9-2Q9BYQ4 174 aa4.39□□□□□ -1.71
PAXBP1-202ENST00000331923 MT3P25713 68 aa4.39□□□□□ -1.71
PAXBP1-202ENST00000331923 MT4P47944 62 aa4.37□□□□□ -1.71
PAXBP1-202ENST00000331923 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
PAXBP1-202ENST00000331923 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
PAXBP1-202ENST00000331923 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
PAXBP1-202ENST00000331923 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
PAXBP1-202ENST00000331923 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
PAXBP1-202ENST00000331923 MUC19Q7Z5P9 8384 aa4.16□□□□□ -1.74
PAXBP1-202ENST00000331923 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
PAXBP1-202ENST00000331923 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
PAXBP1-202ENST00000331923 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.85□□□□□ -1.79
PAXBP1-202ENST00000331923 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
PAXBP1-202ENST00000331923 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
PAXBP1-202ENST00000331923 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
PAXBP1-202ENST00000331923 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
PAXBP1-202ENST00000331923 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
PAXBP1-202ENST00000331923 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
PAXBP1-202ENST00000331923 NEBP20929 6669 aa3.58□□□□□ -1.84
PAXBP1-202ENST00000331923 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
PAXBP1-202ENST00000331923 LCE4AQ5TA78 99 aa3.53□□□□□ -1.84
PAXBP1-202ENST00000331923 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
PAXBP1-202ENST00000331923 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
PAXBP1-202ENST00000331923 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
PAXBP1-202ENST00000331923 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
PAXBP1-202ENST00000331923 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
PAXBP1-202ENST00000331923 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
PAXBP1-202ENST00000331923 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
PAXBP1-202ENST00000331923 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
PAXBP1-202ENST00000331923 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
PAXBP1-202ENST00000331923 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
PAXBP1-202ENST00000331923 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.92
PAXBP1-202ENST00000331923 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.92
PAXBP1-202ENST00000331923 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
PAXBP1-202ENST00000331923 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
PAXBP1-202ENST00000331923 AHNAK2Q8IVF2 5795 aa2.85□□□□□ -1.95
PAXBP1-202ENST00000331923 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
PAXBP1-202ENST00000331923 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
PAXBP1-202ENST00000331923 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
PAXBP1-202ENST00000331923 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
PAXBP1-202ENST00000331923 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
PAXBP1-202ENST00000331923 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
PAXBP1-202ENST00000331923 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
PAXBP1-202ENST00000331923 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
PAXBP1-202ENST00000331923 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
PAXBP1-202ENST00000331923 PHGR1C9JFL3 82 aa2□□□□□ -2.09
PAXBP1-202ENST00000331923 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 83.9 ms