RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 LCE3BQ5TA77 95 aa3.71□□□□□ -1.82
C11orf54-201ENST00000331239 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
C11orf54-201ENST00000331239 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
C11orf54-201ENST00000331239 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
C11orf54-201ENST00000331239 KRTAP8-1Q8IUC2 63 aa3.63□□□□□ -1.83
C11orf54-201ENST00000331239 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
C11orf54-201ENST00000331239 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
C11orf54-201ENST00000331239 KMT2DO14686 5537 aa3.62□□□□□ -1.83
C11orf54-201ENST00000331239 KRTAP6-3Q3LI67 103 aa3.62□□□□□ -1.83
C11orf54-201ENST00000331239 KRTAP5-9P26371 169 aa3.6□□□□□ -1.83
C11orf54-201ENST00000331239 MUC12Q9UKN1 5478 aa3.59□□□□□ -1.84
C11orf54-201ENST00000331239 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
C11orf54-201ENST00000331239 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
C11orf54-201ENST00000331239 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
C11orf54-201ENST00000331239 KRTAP19-7Q3SYF9 63 aa3.51□□□□□ -1.85
C11orf54-201ENST00000331239 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
C11orf54-201ENST00000331239 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
C11orf54-201ENST00000331239 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
C11orf54-201ENST00000331239 MT1EP04732 61 aa3.47□□□□□ -1.85
C11orf54-201ENST00000331239 NEBP20929 6669 aa3.44□□□□□ -1.86
C11orf54-201ENST00000331239 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
C11orf54-201ENST00000331239 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.86
C11orf54-201ENST00000331239 MT1GP13640 62 aa3.39□□□□□ -1.87
C11orf54-201ENST00000331239 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
C11orf54-201ENST00000331239 MT1LQ93083 61 aa3.38□□□□□ -1.87
C11orf54-201ENST00000331239 SPRR2EP22531 72 aa3.36□□□□□ -1.87
C11orf54-201ENST00000331239 SPRR2BP35325 72 aa3.36□□□□□ -1.87
C11orf54-201ENST00000331239 SPRR2AP35326 72 aa3.36□□□□□ -1.87
C11orf54-201ENST00000331239 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
C11orf54-201ENST00000331239 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
C11orf54-201ENST00000331239 MT1MQ8N339 61 aa3.28□□□□□ -1.88
C11orf54-201ENST00000331239 SPRR2DP22532 72 aa3.26□□□□□ -1.89
C11orf54-201ENST00000331239 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
C11orf54-201ENST00000331239 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
C11orf54-201ENST00000331239 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
C11orf54-201ENST00000331239 KRTAP2-3P0C7H8 128 aa3.2□□□□□ -1.9
C11orf54-201ENST00000331239 KRTAP2-4Q9BYR9 128 aa3.2□□□□□ -1.9
C11orf54-201ENST00000331239 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
C11orf54-201ENST00000331239 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
C11orf54-201ENST00000331239 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
C11orf54-201ENST00000331239 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
C11orf54-201ENST00000331239 MT3P25713 68 aa3.02□□□□□ -1.93
C11orf54-201ENST00000331239 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
C11orf54-201ENST00000331239 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
C11orf54-201ENST00000331239 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
C11orf54-201ENST00000331239 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
C11orf54-201ENST00000331239 MT1AP04731 61 aa2.92□□□□□ -1.94
C11orf54-201ENST00000331239 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
C11orf54-201ENST00000331239 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
C11orf54-201ENST00000331239 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
C11orf54-201ENST00000331239 MT4P47944 62 aa2.8□□□□□ -1.96
C11orf54-201ENST00000331239 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
C11orf54-201ENST00000331239 SYNE1Q8NF91 8797 aaKnown RBP2.7□□□□□ -1.98
C11orf54-201ENST00000331239 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
C11orf54-201ENST00000331239 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
C11orf54-201ENST00000331239 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
C11orf54-201ENST00000331239 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
C11orf54-201ENST00000331239 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
C11orf54-201ENST00000331239 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
C11orf54-201ENST00000331239 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
C11orf54-201ENST00000331239 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
C11orf54-201ENST00000331239 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
C11orf54-201ENST00000331239 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
C11orf54-201ENST00000331239 PRM1P04553 51 aa2.39□□□□□ -2.03
C11orf54-201ENST00000331239 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
C11orf54-201ENST00000331239 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
C11orf54-201ENST00000331239 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
C11orf54-201ENST00000331239 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
C11orf54-201ENST00000331239 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
C11orf54-201ENST00000331239 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
C11orf54-201ENST00000331239 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
C11orf54-201ENST00000331239 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
C11orf54-201ENST00000331239 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
C11orf54-201ENST00000331239 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
C11orf54-201ENST00000331239 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
C11orf54-201ENST00000331239 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
C11orf54-201ENST00000331239 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 284.5 ms