RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 KRTAP4-3Q9BYR4 195 aa6.05□□□□□ -1.44
NPLOC4-201ENST00000331134 SPRR2EP22531 72 aa6.03□□□□□ -1.44
NPLOC4-201ENST00000331134 SPRR2BP35325 72 aa6.03□□□□□ -1.44
NPLOC4-201ENST00000331134 SPRR2AP35326 72 aa6.03□□□□□ -1.44
NPLOC4-201ENST00000331134 LCE3EQ5T5B0 92 aa6.03□□□□□ -1.44
NPLOC4-201ENST00000331134 KRTAP19-3Q7Z4W3 81 aa5.99□□□□□ -1.45
NPLOC4-201ENST00000331134 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
NPLOC4-201ENST00000331134 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
NPLOC4-201ENST00000331134 USH2AO75445 5202 aa5.87□□□□□ -1.47
NPLOC4-201ENST00000331134 MT1MQ8N339 61 aa5.84□□□□□ -1.47
NPLOC4-201ENST00000331134 KMT2DO14686 5537 aa5.82□□□□□ -1.48
NPLOC4-201ENST00000331134 KRTAP9-6A8MVA2 160 aa5.81□□□□□ -1.48
NPLOC4-201ENST00000331134 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
NPLOC4-201ENST00000331134 PRM1P04553 51 aa5.79□□□□□ -1.48
NPLOC4-201ENST00000331134 SYNE2Q8WXH0 6885 aaKnown RBP5.77□□□□□ -1.49
NPLOC4-201ENST00000331134 SPRR2DP22532 72 aa5.77□□□□□ -1.49
NPLOC4-201ENST00000331134 KRTAP2-3P0C7H8 128 aa5.71□□□□□ -1.5
NPLOC4-201ENST00000331134 KRTAP2-4Q9BYR9 128 aa5.71□□□□□ -1.5
NPLOC4-201ENST00000331134 KRTAP2-1Q9BYU5 128 aa5.71□□□□□ -1.5
NPLOC4-201ENST00000331134 KRTAP19-6Q3LI70 58 aa5.53□□□□□ -1.52
NPLOC4-201ENST00000331134 LCE2AQ5TA79 106 aaPredicted RBP5.46□□□□□ -1.53
NPLOC4-201ENST00000331134 MT3P25713 68 aa5.45□□□□□ -1.54
NPLOC4-201ENST00000331134 MT4P47944 62 aa5.34□□□□□ -1.55
NPLOC4-201ENST00000331134 MT1AP04731 61 aa5.34□□□□□ -1.55
NPLOC4-201ENST00000331134 MACF1Q9UPN3 7388 aaKnown RBP5.33□□□□□ -1.56
NPLOC4-201ENST00000331134 LCE2DQ5TA82 110 aaPredicted RBP5.32□□□□□ -1.56
NPLOC4-201ENST00000331134 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
NPLOC4-201ENST00000331134 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
NPLOC4-201ENST00000331134 LCE1BQ5T7P3 118 aa5.26□□□□□ -1.57
NPLOC4-201ENST00000331134 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
NPLOC4-201ENST00000331134 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
NPLOC4-201ENST00000331134 MUC19Q7Z5P9 8384 aa5.23□□□□□ -1.57
NPLOC4-201ENST00000331134 SSPOA2VEC9 5147 aa5.16□□□□□ -1.58
NPLOC4-201ENST00000331134 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
NPLOC4-201ENST00000331134 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
NPLOC4-201ENST00000331134 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
NPLOC4-201ENST00000331134 KRTAP9-4Q9BYQ2 154 aa4.88□□□□□ -1.63
NPLOC4-201ENST00000331134 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
NPLOC4-201ENST00000331134 MDN1Q9NU22 5596 aa4.79□□□□□ -1.64
NPLOC4-201ENST00000331134 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.66
NPLOC4-201ENST00000331134 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
NPLOC4-201ENST00000331134 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
NPLOC4-201ENST00000331134 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.7
NPLOC4-201ENST00000331134 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
NPLOC4-201ENST00000331134 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
NPLOC4-201ENST00000331134 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
NPLOC4-201ENST00000331134 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
NPLOC4-201ENST00000331134 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
NPLOC4-201ENST00000331134 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
NPLOC4-201ENST00000331134 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
NPLOC4-201ENST00000331134 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
NPLOC4-201ENST00000331134 NEBP20929 6669 aa4.17□□□□□ -1.74
NPLOC4-201ENST00000331134 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
NPLOC4-201ENST00000331134 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
NPLOC4-201ENST00000331134 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
NPLOC4-201ENST00000331134 KRTAP4-4Q9BYR3 166 aa3.96□□□□□ -1.77
NPLOC4-201ENST00000331134 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
NPLOC4-201ENST00000331134 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
NPLOC4-201ENST00000331134 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
NPLOC4-201ENST00000331134 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
NPLOC4-201ENST00000331134 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
NPLOC4-201ENST00000331134 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
NPLOC4-201ENST00000331134 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
NPLOC4-201ENST00000331134 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
NPLOC4-201ENST00000331134 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
NPLOC4-201ENST00000331134 KRTAP5-3Q6L8H2 238 aa3.18□□□□□ -1.9
NPLOC4-201ENST00000331134 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
NPLOC4-201ENST00000331134 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
NPLOC4-201ENST00000331134 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
NPLOC4-201ENST00000331134 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.96
NPLOC4-201ENST00000331134 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
NPLOC4-201ENST00000331134 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
NPLOC4-201ENST00000331134 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
NPLOC4-201ENST00000331134 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
NPLOC4-201ENST00000331134 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
NPLOC4-201ENST00000331134 PHGR1C9JFL3 82 aa2.34□□□□□ -2.04
NPLOC4-201ENST00000331134 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms