RNA–Protein interactions for RNA: ENST00000329608.10

CSF1-201, Transcript of colony stimulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-201ENST00000329608 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
CSF1-201ENST00000329608 SPRR2FQ96RM1 72 aa4.9□□□□□ -1.62
CSF1-201ENST00000329608 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
CSF1-201ENST00000329608 MT1GP13640 62 aa4.87□□□□□ -1.63
CSF1-201ENST00000329608 LCE2DQ5TA82 110 aaPredicted RBP4.85□□□□□ -1.63
CSF1-201ENST00000329608 MACF1Q9UPN3 7388 aaKnown RBP4.84□□□□□ -1.63
CSF1-201ENST00000329608 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
CSF1-201ENST00000329608 SYNE2Q8WXH0 6885 aaKnown RBP4.78□□□□□ -1.64
CSF1-201ENST00000329608 MT1MQ8N339 61 aa4.78□□□□□ -1.64
CSF1-201ENST00000329608 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
CSF1-201ENST00000329608 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
CSF1-201ENST00000329608 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
CSF1-201ENST00000329608 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
CSF1-201ENST00000329608 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
CSF1-201ENST00000329608 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
CSF1-201ENST00000329608 KRTAP9-2Q9BYQ4 174 aa4.67□□□□□ -1.66
CSF1-201ENST00000329608 MDN1Q9NU22 5596 aa4.63□□□□□ -1.67
CSF1-201ENST00000329608 LCE5AQ5TCM9 118 aa4.59□□□□□ -1.67
CSF1-201ENST00000329608 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
CSF1-201ENST00000329608 KRTAP12-4P60329 112 aa4.51□□□□□ -1.69
CSF1-201ENST00000329608 SPRR2EP22531 72 aa4.47□□□□□ -1.69
CSF1-201ENST00000329608 SPRR2BP35325 72 aa4.47□□□□□ -1.69
CSF1-201ENST00000329608 SPRR2AP35326 72 aa4.47□□□□□ -1.69
CSF1-201ENST00000329608 LCE1AQ5T7P2 110 aa4.41□□□□□ -1.7
CSF1-201ENST00000329608 KRTAP4-9Q9BYQ8 210 aa4.39□□□□□ -1.71
CSF1-201ENST00000329608 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
CSF1-201ENST00000329608 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
CSF1-201ENST00000329608 SPRR2DP22532 72 aa4.27□□□□□ -1.73
CSF1-201ENST00000329608 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
CSF1-201ENST00000329608 MT1AP04731 61 aa4.22□□□□□ -1.73
CSF1-201ENST00000329608 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.16□□□□□ -1.74
CSF1-201ENST00000329608 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
CSF1-201ENST00000329608 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
CSF1-201ENST00000329608 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
CSF1-201ENST00000329608 KRTAP6-3Q3LI67 103 aa4.06□□□□□ -1.76
CSF1-201ENST00000329608 KRTAP9-4Q9BYQ2 154 aa3.99□□□□□ -1.77
CSF1-201ENST00000329608 PRM1P04553 51 aa3.98□□□□□ -1.77
CSF1-201ENST00000329608 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
CSF1-201ENST00000329608 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.79
CSF1-201ENST00000329608 MT3P25713 68 aa3.88□□□□□ -1.79
CSF1-201ENST00000329608 MT4P47944 62 aa3.87□□□□□ -1.79
CSF1-201ENST00000329608 NEBP20929 6669 aa3.82□□□□□ -1.8
CSF1-201ENST00000329608 KRTAP4-6Q9BYQ5 205 aa3.76□□□□□ -1.81
CSF1-201ENST00000329608 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
CSF1-201ENST00000329608 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
CSF1-201ENST00000329608 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
CSF1-201ENST00000329608 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
CSF1-201ENST00000329608 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
CSF1-201ENST00000329608 LCE4AQ5TA78 99 aa3.53□□□□□ -1.84
CSF1-201ENST00000329608 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
CSF1-201ENST00000329608 KRTAP2-2Q9BYT5 123 aa3.49□□□□□ -1.85
CSF1-201ENST00000329608 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.85
CSF1-201ENST00000329608 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
CSF1-201ENST00000329608 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
CSF1-201ENST00000329608 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
CSF1-201ENST00000329608 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
CSF1-201ENST00000329608 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
CSF1-201ENST00000329608 KRTAP4-11Q9BYQ6 195 aa3.03□□□□□ -1.92
CSF1-201ENST00000329608 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
CSF1-201ENST00000329608 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
CSF1-201ENST00000329608 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
CSF1-201ENST00000329608 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
CSF1-201ENST00000329608 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
CSF1-201ENST00000329608 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
CSF1-201ENST00000329608 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
CSF1-201ENST00000329608 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
CSF1-201ENST00000329608 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
CSF1-201ENST00000329608 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
CSF1-201ENST00000329608 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
CSF1-201ENST00000329608 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
CSF1-201ENST00000329608 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -1.99
CSF1-201ENST00000329608 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
CSF1-201ENST00000329608 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
CSF1-201ENST00000329608 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
CSF1-201ENST00000329608 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
CSF1-201ENST00000329608 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
CSF1-201ENST00000329608 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 89 ms