RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
PGBD2-201ENST00000329291 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
PGBD2-201ENST00000329291 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
PGBD2-201ENST00000329291 SPRR2FQ96RM1 72 aa5.44□□□□□ -1.54
PGBD2-201ENST00000329291 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
PGBD2-201ENST00000329291 SYNE2Q8WXH0 6885 aaKnown RBP5.38□□□□□ -1.55
PGBD2-201ENST00000329291 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
PGBD2-201ENST00000329291 MT1GP13640 62 aa5.36□□□□□ -1.55
PGBD2-201ENST00000329291 MT1MQ8N339 61 aa5.32□□□□□ -1.56
PGBD2-201ENST00000329291 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
PGBD2-201ENST00000329291 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
PGBD2-201ENST00000329291 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
PGBD2-201ENST00000329291 MDN1Q9NU22 5596 aa5.26□□□□□ -1.57
PGBD2-201ENST00000329291 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
PGBD2-201ENST00000329291 LCE1AQ5T7P2 110 aa5.16□□□□□ -1.58
PGBD2-201ENST00000329291 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
PGBD2-201ENST00000329291 KRTAP6-3Q3LI67 103 aa5.14□□□□□ -1.59
PGBD2-201ENST00000329291 SPRR2EP22531 72 aa5.12□□□□□ -1.59
PGBD2-201ENST00000329291 SPRR2BP35325 72 aa5.12□□□□□ -1.59
PGBD2-201ENST00000329291 SPRR2AP35326 72 aa5.12□□□□□ -1.59
PGBD2-201ENST00000329291 KRTAP2-3P0C7H8 128 aa5.11□□□□□ -1.59
PGBD2-201ENST00000329291 KRTAP2-4Q9BYR9 128 aa5.11□□□□□ -1.59
PGBD2-201ENST00000329291 KRTAP2-1Q9BYU5 128 aa5.11□□□□□ -1.59
PGBD2-201ENST00000329291 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
PGBD2-201ENST00000329291 SPRR2DP22532 72 aa4.93□□□□□ -1.62
PGBD2-201ENST00000329291 INE1O15225 51 aa4.83□□□□□ -1.64
PGBD2-201ENST00000329291 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
PGBD2-201ENST00000329291 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
PGBD2-201ENST00000329291 LCE3BQ5TA77 95 aa4.72□□□□□ -1.65
PGBD2-201ENST00000329291 MT1AP04731 61 aa4.71□□□□□ -1.66
PGBD2-201ENST00000329291 NEBP20929 6669 aa4.67□□□□□ -1.66
PGBD2-201ENST00000329291 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
PGBD2-201ENST00000329291 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
PGBD2-201ENST00000329291 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
PGBD2-201ENST00000329291 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
PGBD2-201ENST00000329291 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
PGBD2-201ENST00000329291 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
PGBD2-201ENST00000329291 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
PGBD2-201ENST00000329291 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
PGBD2-201ENST00000329291 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
PGBD2-201ENST00000329291 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
PGBD2-201ENST00000329291 MT4P47944 62 aa4.28□□□□□ -1.72
PGBD2-201ENST00000329291 MT3P25713 68 aa4.28□□□□□ -1.72
PGBD2-201ENST00000329291 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
PGBD2-201ENST00000329291 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
PGBD2-201ENST00000329291 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
PGBD2-201ENST00000329291 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
PGBD2-201ENST00000329291 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
PGBD2-201ENST00000329291 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
PGBD2-201ENST00000329291 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
PGBD2-201ENST00000329291 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
PGBD2-201ENST00000329291 PRM1P04553 51 aa3.85□□□□□ -1.79
PGBD2-201ENST00000329291 LCE1EQ5T753 118 aa3.65□□□□□ -1.82
PGBD2-201ENST00000329291 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
PGBD2-201ENST00000329291 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
PGBD2-201ENST00000329291 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
PGBD2-201ENST00000329291 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
PGBD2-201ENST00000329291 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
PGBD2-201ENST00000329291 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
PGBD2-201ENST00000329291 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
PGBD2-201ENST00000329291 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
PGBD2-201ENST00000329291 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
PGBD2-201ENST00000329291 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
PGBD2-201ENST00000329291 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
PGBD2-201ENST00000329291 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
PGBD2-201ENST00000329291 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
PGBD2-201ENST00000329291 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
PGBD2-201ENST00000329291 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
PGBD2-201ENST00000329291 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
PGBD2-201ENST00000329291 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
PGBD2-201ENST00000329291 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
PGBD2-201ENST00000329291 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
PGBD2-201ENST00000329291 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
PGBD2-201ENST00000329291 PHGR1C9JFL3 82 aa2.57□□□□□ -2
PGBD2-201ENST00000329291 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
PGBD2-201ENST00000329291 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
PGBD2-201ENST00000329291 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 86 ms