RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 C10orf95Q9H7T3 257 aa6.42□□□□□ -1.38
CLDN6-201ENST00000328796 TNP1P09430 55 aa6.32□□□□□ -1.4
CLDN6-201ENST00000328796 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
CLDN6-201ENST00000328796 KRTAP19-7Q3SYF9 63 aa6.32□□□□□ -1.4
CLDN6-201ENST00000328796 MT1EP04732 61 aa6.26□□□□□ -1.41
CLDN6-201ENST00000328796 SPRR2DP22532 72 aa6.24□□□□□ -1.41
CLDN6-201ENST00000328796 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
CLDN6-201ENST00000328796 KRTAP2-2Q9BYT5 123 aa6.21□□□□□ -1.41
CLDN6-201ENST00000328796 KRTAP2-1Q9BYU5 128 aa6.21□□□□□ -1.41
CLDN6-201ENST00000328796 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
CLDN6-201ENST00000328796 LCE5AQ5TCM9 118 aa6.14□□□□□ -1.43
CLDN6-201ENST00000328796 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
CLDN6-201ENST00000328796 PP632Q6XCG6 107 aa6.11□□□□□ -1.43
CLDN6-201ENST00000328796 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
CLDN6-201ENST00000328796 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
CLDN6-201ENST00000328796 LCE3BQ5TA77 95 aa6.05□□□□□ -1.44
CLDN6-201ENST00000328796 MT1GP13640 62 aa6.04□□□□□ -1.44
CLDN6-201ENST00000328796 MT1LQ93083 61 aa6.03□□□□□ -1.44
CLDN6-201ENST00000328796 KRTAP4-12Q9BQ66 201 aa6.03□□□□□ -1.44
CLDN6-201ENST00000328796 GPR98Q8WXG9 6306 aa6□□□□□ -1.45
CLDN6-201ENST00000328796 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
CLDN6-201ENST00000328796 MT1MQ8N339 61 aa5.93□□□□□ -1.46
CLDN6-201ENST00000328796 DSTQ03001 7570 aaKnown RBP5.91□□□□□ -1.46
CLDN6-201ENST00000328796 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
CLDN6-201ENST00000328796 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
CLDN6-201ENST00000328796 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
CLDN6-201ENST00000328796 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
CLDN6-201ENST00000328796 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
CLDN6-201ENST00000328796 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
CLDN6-201ENST00000328796 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
CLDN6-201ENST00000328796 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
CLDN6-201ENST00000328796 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
CLDN6-201ENST00000328796 KRTAP5-4Q6L8H1 288 aa5.53□□□□□ -1.52
CLDN6-201ENST00000328796 HMCN1Q96RW7 5635 aa5.49□□□□□ -1.53
CLDN6-201ENST00000328796 AHNAK2Q8IVF2 5795 aa5.46□□□□□ -1.54
CLDN6-201ENST00000328796 MT4P47944 62 aa5.42□□□□□ -1.54
CLDN6-201ENST00000328796 KRTAP5-5Q701N2 237 aaPredicted RBP5.42□□□□□ -1.54
CLDN6-201ENST00000328796 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
CLDN6-201ENST00000328796 LUZP6Q538Z0 58 aa5.3□□□□□ -1.56
CLDN6-201ENST00000328796 KRTAP5-10Q6L8G5 202 aa5.29□□□□□ -1.56
CLDN6-201ENST00000328796 KRTAP9-6A8MVA2 160 aa5.23□□□□□ -1.57
CLDN6-201ENST00000328796 SYNE1Q8NF91 8797 aaKnown RBP5.19□□□□□ -1.58
CLDN6-201ENST00000328796 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
CLDN6-201ENST00000328796 NDUFAF8A1L188 74 aa5.18□□□□□ -1.58
CLDN6-201ENST00000328796 KRTAP20-2Q3LI61 65 aa5.17□□□□□ -1.58
CLDN6-201ENST00000328796 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
CLDN6-201ENST00000328796 MT1AP04731 61 aa5.14□□□□□ -1.59
CLDN6-201ENST00000328796 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
CLDN6-201ENST00000328796 KRTAP4-2Q9BYR5 136 aa5.1□□□□□ -1.59
CLDN6-201ENST00000328796 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
CLDN6-201ENST00000328796 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
CLDN6-201ENST00000328796 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
CLDN6-201ENST00000328796 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
CLDN6-201ENST00000328796 MT3P25713 68 aa4.67□□□□□ -1.66
CLDN6-201ENST00000328796 A0A0A0MQY5 61 aa4.66□□□□□ -1.66
CLDN6-201ENST00000328796 AHNAKQ09666 5890 aaKnown RBP4.63□□□□□ -1.67
CLDN6-201ENST00000328796 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
CLDN6-201ENST00000328796 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
CLDN6-201ENST00000328796 MUC5BQ9HC84 5762 aaPredicted RBP4.51□□□□□ -1.69
CLDN6-201ENST00000328796 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
CLDN6-201ENST00000328796 INE1O15225 51 aa4.38□□□□□ -1.71
CLDN6-201ENST00000328796 KRTAP5-1Q6L8H4 278 aa4.32□□□□□ -1.72
CLDN6-201ENST00000328796 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
CLDN6-201ENST00000328796 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
CLDN6-201ENST00000328796 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
CLDN6-201ENST00000328796 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
CLDN6-201ENST00000328796 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
CLDN6-201ENST00000328796 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
CLDN6-201ENST00000328796 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
CLDN6-201ENST00000328796 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
CLDN6-201ENST00000328796 PRM1P04553 51 aa3.39□□□□□ -1.87
CLDN6-201ENST00000328796 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
CLDN6-201ENST00000328796 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
CLDN6-201ENST00000328796 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
CLDN6-201ENST00000328796 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
CLDN6-201ENST00000328796 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
CLDN6-201ENST00000328796 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 50.7 ms