RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 PRM1P04553 51 aa3.94□□□□□ -1.78
TRAK1-201ENST00000327628 KRTAP9-2Q9BYQ4 174 aa3.93□□□□□ -1.78
TRAK1-201ENST00000327628 KRTAP4-7Q9BYR0 210 aa3.93□□□□□ -1.78
TRAK1-201ENST00000327628 MT4P47944 62 aa3.91□□□□□ -1.78
TRAK1-201ENST00000327628 FLGP20930 4061 aaPredicted RBP3.88□□□□□ -1.79
TRAK1-201ENST00000327628 ABCA13Q86UQ4 5058 aa3.87□□□□□ -1.79
TRAK1-201ENST00000327628 LCE2AQ5TA79 106 aaPredicted RBP3.85□□□□□ -1.79
TRAK1-201ENST00000327628 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.79
TRAK1-201ENST00000327628 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.8
TRAK1-201ENST00000327628 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.8
TRAK1-201ENST00000327628 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.8
TRAK1-201ENST00000327628 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
TRAK1-201ENST00000327628 LCE1DQ5T752 114 aa3.82□□□□□ -1.8
TRAK1-201ENST00000327628 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
TRAK1-201ENST00000327628 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
TRAK1-201ENST00000327628 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
TRAK1-201ENST00000327628 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
TRAK1-201ENST00000327628 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
TRAK1-201ENST00000327628 LOC100996750A0A140TA64 210 aa3.73□□□□□ -1.81
TRAK1-201ENST00000327628 HMCN2Q8NDA2 5059 aa3.72□□□□□ -1.81
TRAK1-201ENST00000327628 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
TRAK1-201ENST00000327628 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
TRAK1-201ENST00000327628 FSIP2Q5CZC0 6907 aa3.67□□□□□ -1.82
TRAK1-201ENST00000327628 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
TRAK1-201ENST00000327628 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.82
TRAK1-201ENST00000327628 RNF213Q63HN8 5207 aa3.63□□□□□ -1.83
TRAK1-201ENST00000327628 MUC2Q02817 5179 aa3.61□□□□□ -1.83
TRAK1-201ENST00000327628 KRTAP9-7A8MTY7 169 aa3.58□□□□□ -1.84
TRAK1-201ENST00000327628 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
TRAK1-201ENST00000327628 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
TRAK1-201ENST00000327628 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
TRAK1-201ENST00000327628 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
TRAK1-201ENST00000327628 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
TRAK1-201ENST00000327628 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.44□□□□□ -1.86
TRAK1-201ENST00000327628 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
TRAK1-201ENST00000327628 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
TRAK1-201ENST00000327628 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
TRAK1-201ENST00000327628 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
TRAK1-201ENST00000327628 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
TRAK1-201ENST00000327628 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
TRAK1-201ENST00000327628 USH2AO75445 5202 aa3.27□□□□□ -1.89
TRAK1-201ENST00000327628 SYNE2Q8WXH0 6885 aaKnown RBP3.27□□□□□ -1.89
TRAK1-201ENST00000327628 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
TRAK1-201ENST00000327628 KMT2DO14686 5537 aa3.17□□□□□ -1.9
TRAK1-201ENST00000327628 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
TRAK1-201ENST00000327628 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
TRAK1-201ENST00000327628 MACF1Q9UPN3 7388 aaKnown RBP3.1□□□□□ -1.91
TRAK1-201ENST00000327628 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
TRAK1-201ENST00000327628 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
TRAK1-201ENST00000327628 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
TRAK1-201ENST00000327628 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
TRAK1-201ENST00000327628 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
TRAK1-201ENST00000327628 NEBP20929 6669 aa2.86□□□□□ -1.95
TRAK1-201ENST00000327628 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
TRAK1-201ENST00000327628 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
TRAK1-201ENST00000327628 MDN1Q9NU22 5596 aa2.74□□□□□ -1.97
TRAK1-201ENST00000327628 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
TRAK1-201ENST00000327628 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
TRAK1-201ENST00000327628 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
TRAK1-201ENST00000327628 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
TRAK1-201ENST00000327628 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
TRAK1-201ENST00000327628 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
TRAK1-201ENST00000327628 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
TRAK1-201ENST00000327628 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
TRAK1-201ENST00000327628 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
TRAK1-201ENST00000327628 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
TRAK1-201ENST00000327628 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
TRAK1-201ENST00000327628 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
TRAK1-201ENST00000327628 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
TRAK1-201ENST00000327628 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
TRAK1-201ENST00000327628 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.12
TRAK1-201ENST00000327628 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
TRAK1-201ENST00000327628 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
TRAK1-201ENST00000327628 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
TRAK1-201ENST00000327628 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
TRAK1-201ENST00000327628 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
TRAK1-201ENST00000327628 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 69.5 ms