RNA–Protein interactions for RNA: ENST00000324306.10

ZKSCAN1-201, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN1, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-201ENST00000324306 RNF213Q63HN8 5207 aa2.77□□□□□ -1.97
ZKSCAN1-201ENST00000324306 KRTAP4-7Q9BYR0 210 aa2.76□□□□□ -1.97
ZKSCAN1-201ENST00000324306 MUC17Q685J3 4493 aa2.76□□□□□ -1.97
ZKSCAN1-201ENST00000324306 UBR4Q5T4S7 5183 aa2.75□□□□□ -1.97
ZKSCAN1-201ENST00000324306 LPAP08519 4548 aa2.72□□□□□ -1.97
ZKSCAN1-201ENST00000324306 KRTAP19-6Q3LI70 58 aa2.7□□□□□ -1.98
ZKSCAN1-201ENST00000324306 LCE2DQ5TA82 110 aaPredicted RBP2.7□□□□□ -1.98
ZKSCAN1-201ENST00000324306 KRTAP9-2Q9BYQ4 174 aa2.66□□□□□ -1.98
ZKSCAN1-201ENST00000324306 KRTAP9-6A0A140TA67 174 aa2.65□□□□□ -1.98
ZKSCAN1-201ENST00000324306 LOC100996750A0A140TA64 210 aa2.65□□□□□ -1.99
ZKSCAN1-201ENST00000324306 KRTAP19-7Q3SYF9 63 aa2.63□□□□□ -1.99
ZKSCAN1-201ENST00000324306 LCE1DQ5T752 114 aa2.59□□□□□ -2
ZKSCAN1-201ENST00000324306 HMCN2Q8NDA2 5059 aa2.57□□□□□ -2
ZKSCAN1-201ENST00000324306 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
ZKSCAN1-201ENST00000324306 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
ZKSCAN1-201ENST00000324306 MT4P47944 62 aa2.54□□□□□ -2
ZKSCAN1-201ENST00000324306 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
ZKSCAN1-201ENST00000324306 USH2AO75445 5202 aa2.52□□□□□ -2.01
ZKSCAN1-201ENST00000324306 LCE2AQ5TA79 106 aaPredicted RBP2.52□□□□□ -2.01
ZKSCAN1-201ENST00000324306 FAT4Q6V0I7 4981 aa2.51□□□□□ -2.01
ZKSCAN1-201ENST00000324306 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
ZKSCAN1-201ENST00000324306 KRTAP9-4Q9BYQ2 154 aa2.48□□□□□ -2.01
ZKSCAN1-201ENST00000324306 KRTAP4-9Q9BYQ8 210 aa2.46□□□□□ -2.01
ZKSCAN1-201ENST00000324306 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
ZKSCAN1-201ENST00000324306 KRTAP9-7A8MTY7 169 aa2.44□□□□□ -2.02
ZKSCAN1-201ENST00000324306 KRTAP20-1Q3LI63 56 aa2.44□□□□□ -2.02
ZKSCAN1-201ENST00000324306 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
ZKSCAN1-201ENST00000324306 LCE5AQ5TCM9 118 aa2.43□□□□□ -2.02
ZKSCAN1-201ENST00000324306 LCE4AQ5TA78 99 aa2.38□□□□□ -2.03
ZKSCAN1-201ENST00000324306 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
ZKSCAN1-201ENST00000324306 MUC2Q02817 5179 aa2.36□□□□□ -2.03
ZKSCAN1-201ENST00000324306 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
ZKSCAN1-201ENST00000324306 KRTAP6-3Q3LI67 103 aa2.27□□□□□ -2.05
ZKSCAN1-201ENST00000324306 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.27□□□□□ -2.05
ZKSCAN1-201ENST00000324306 MDN1Q9NU22 5596 aa2.23□□□□□ -2.05
ZKSCAN1-201ENST00000324306 SYNE2Q8WXH0 6885 aaKnown RBP2.22□□□□□ -2.05
ZKSCAN1-201ENST00000324306 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
ZKSCAN1-201ENST00000324306 SYNE1Q8NF91 8797 aaKnown RBP2.19□□□□□ -2.06
ZKSCAN1-201ENST00000324306 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
ZKSCAN1-201ENST00000324306 LCE1EQ5T753 118 aa2.18□□□□□ -2.06
ZKSCAN1-201ENST00000324306 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
ZKSCAN1-201ENST00000324306 FSIP2Q5CZC0 6907 aa2.18□□□□□ -2.06
ZKSCAN1-201ENST00000324306 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
ZKSCAN1-201ENST00000324306 NEBP20929 6669 aa2.13□□□□□ -2.07
ZKSCAN1-201ENST00000324306 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
ZKSCAN1-201ENST00000324306 KMT2DO14686 5537 aa2.11□□□□□ -2.07
ZKSCAN1-201ENST00000324306 FCGBPQ9Y6R7 5405 aaPredicted RBP2.1□□□□□ -2.07
ZKSCAN1-201ENST00000324306 KRTAP5-9P26371 169 aa2.06□□□□□ -2.08
ZKSCAN1-201ENST00000324306 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
ZKSCAN1-201ENST00000324306 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
ZKSCAN1-201ENST00000324306 KRTAP9-9Q9BYP9 154 aa2.03□□□□□ -2.08
ZKSCAN1-201ENST00000324306 KRTAP4-11Q9BYQ6 195 aa2.03□□□□□ -2.09
ZKSCAN1-201ENST00000324306 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
ZKSCAN1-201ENST00000324306 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
ZKSCAN1-201ENST00000324306 KRTAP5-4Q6L8H1 288 aa1.84□□□□□ -2.11
ZKSCAN1-201ENST00000324306 KRTAP4-6Q9BYQ5 205 aa1.84□□□□□ -2.11
ZKSCAN1-201ENST00000324306 MACF1Q9UPN3 7388 aaKnown RBP1.71□□□□□ -2.14
ZKSCAN1-201ENST00000324306 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
ZKSCAN1-201ENST00000324306 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
ZKSCAN1-201ENST00000324306 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
ZKSCAN1-201ENST00000324306 OBSCNQ5VST9 7968 aa1.62□□□□□ -2.15
ZKSCAN1-201ENST00000324306 KRTAP5-3Q6L8H2 238 aa1.59□□□□□ -2.15
ZKSCAN1-201ENST00000324306 KRTAP4-12Q9BQ66 201 aa1.56□□□□□ -2.16
ZKSCAN1-201ENST00000324306 KRTAP4-2Q9BYR5 136 aa1.56□□□□□ -2.16
ZKSCAN1-201ENST00000324306 DSTQ03001 7570 aaKnown RBP1.56□□□□□ -2.16
ZKSCAN1-201ENST00000324306 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
ZKSCAN1-201ENST00000324306 KRTAP5-10Q6L8G5 202 aa1.55□□□□□ -2.16
ZKSCAN1-201ENST00000324306 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
ZKSCAN1-201ENST00000324306 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
ZKSCAN1-201ENST00000324306 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.39□□□□□ -2.19
ZKSCAN1-201ENST00000324306 KRTAP5-11Q6L8G4 156 aa1.35□□□□□ -2.19
ZKSCAN1-201ENST00000324306 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
ZKSCAN1-201ENST00000324306 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
ZKSCAN1-201ENST00000324306 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
ZKSCAN1-201ENST00000324306 KRTAP5-1Q6L8H4 278 aa1.29□□□□□ -2.2
ZKSCAN1-201ENST00000324306 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
ZKSCAN1-201ENST00000324306 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms