RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 LCE2DQ5TA82 110 aaPredicted RBP5.74□□□□□ -1.49
PPP3CA-201ENST00000323055 KRTAP19-6Q3LI70 58 aa5.71□□□□□ -1.5
PPP3CA-201ENST00000323055 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
PPP3CA-201ENST00000323055 KRTAP19-3Q7Z4W3 81 aa5.68□□□□□ -1.5
PPP3CA-201ENST00000323055 USH2AO75445 5202 aa5.66□□□□□ -1.5
PPP3CA-201ENST00000323055 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
PPP3CA-201ENST00000323055 SPRR2DP22532 72 aa5.58□□□□□ -1.52
PPP3CA-201ENST00000323055 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
PPP3CA-201ENST00000323055 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
PPP3CA-201ENST00000323055 MT1MQ8N339 61 aa5.51□□□□□ -1.53
PPP3CA-201ENST00000323055 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
PPP3CA-201ENST00000323055 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
PPP3CA-201ENST00000323055 KMT2DO14686 5537 aa5.45□□□□□ -1.54
PPP3CA-201ENST00000323055 DSTQ03001 7570 aaKnown RBP5.44□□□□□ -1.54
PPP3CA-201ENST00000323055 FCGBPQ9Y6R7 5405 aaPredicted RBP5.42□□□□□ -1.54
PPP3CA-201ENST00000323055 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
PPP3CA-201ENST00000323055 SYNE2Q8WXH0 6885 aaKnown RBP5.31□□□□□ -1.56
PPP3CA-201ENST00000323055 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
PPP3CA-201ENST00000323055 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
PPP3CA-201ENST00000323055 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
PPP3CA-201ENST00000323055 KRTAP6-3Q3LI67 103 aa5.15□□□□□ -1.59
PPP3CA-201ENST00000323055 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.59
PPP3CA-201ENST00000323055 SSPOA2VEC9 5147 aa5.14□□□□□ -1.59
PPP3CA-201ENST00000323055 MUC12Q9UKN1 5478 aa5.12□□□□□ -1.59
PPP3CA-201ENST00000323055 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.07□□□□□ -1.6
PPP3CA-201ENST00000323055 KRTAP2-3P0C7H8 128 aa5.05□□□□□ -1.6
PPP3CA-201ENST00000323055 KRTAP2-4Q9BYR9 128 aa5.05□□□□□ -1.6
PPP3CA-201ENST00000323055 KRTAP2-1Q9BYU5 128 aa5.05□□□□□ -1.6
PPP3CA-201ENST00000323055 MT4P47944 62 aa5.04□□□□□ -1.6
PPP3CA-201ENST00000323055 LCE5AQ5TCM9 118 aa5.03□□□□□ -1.6
PPP3CA-201ENST00000323055 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
PPP3CA-201ENST00000323055 MACF1Q9UPN3 7388 aaKnown RBP5.03□□□□□ -1.6
PPP3CA-201ENST00000323055 MT1AP04731 61 aa4.98□□□□□ -1.61
PPP3CA-201ENST00000323055 MT3P25713 68 aa4.97□□□□□ -1.61
PPP3CA-201ENST00000323055 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.62
PPP3CA-201ENST00000323055 KRTAP6-1Q3LI64 71 aa4.89□□□□□ -1.63
PPP3CA-201ENST00000323055 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
PPP3CA-201ENST00000323055 PRM1P04553 51 aa4.75□□□□□ -1.65
PPP3CA-201ENST00000323055 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
PPP3CA-201ENST00000323055 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
PPP3CA-201ENST00000323055 LCE1BQ5T7P3 118 aa4.62□□□□□ -1.67
PPP3CA-201ENST00000323055 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
PPP3CA-201ENST00000323055 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
PPP3CA-201ENST00000323055 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
PPP3CA-201ENST00000323055 KRTAP5-9P26371 169 aa4.54□□□□□ -1.68
PPP3CA-201ENST00000323055 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
PPP3CA-201ENST00000323055 NEBP20929 6669 aa4.35□□□□□ -1.71
PPP3CA-201ENST00000323055 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
PPP3CA-201ENST00000323055 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
PPP3CA-201ENST00000323055 MUC19Q7Z5P9 8384 aa4.01□□□□□ -1.77
PPP3CA-201ENST00000323055 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
PPP3CA-201ENST00000323055 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
PPP3CA-201ENST00000323055 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
PPP3CA-201ENST00000323055 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
PPP3CA-201ENST00000323055 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
PPP3CA-201ENST00000323055 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
PPP3CA-201ENST00000323055 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
PPP3CA-201ENST00000323055 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
PPP3CA-201ENST00000323055 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
PPP3CA-201ENST00000323055 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
PPP3CA-201ENST00000323055 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
PPP3CA-201ENST00000323055 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
PPP3CA-201ENST00000323055 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
PPP3CA-201ENST00000323055 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.86
PPP3CA-201ENST00000323055 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
PPP3CA-201ENST00000323055 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
PPP3CA-201ENST00000323055 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
PPP3CA-201ENST00000323055 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
PPP3CA-201ENST00000323055 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
PPP3CA-201ENST00000323055 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
PPP3CA-201ENST00000323055 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
PPP3CA-201ENST00000323055 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
PPP3CA-201ENST00000323055 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
PPP3CA-201ENST00000323055 PHGR1C9JFL3 82 aa2.58□□□□□ -2
PPP3CA-201ENST00000323055 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
PPP3CA-201ENST00000323055 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
PPP3CA-201ENST00000323055 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 83.8 ms