RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 MT1GP13640 62 aa5.35□□□□□ -1.55
PDE1C-201ENST00000321453 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
PDE1C-201ENST00000321453 FSIP2Q5CZC0 6907 aa5.26□□□□□ -1.57
PDE1C-201ENST00000321453 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
PDE1C-201ENST00000321453 MUC12Q9UKN1 5478 aa5.26□□□□□ -1.57
PDE1C-201ENST00000321453 KRTAP4-9Q9BYQ8 210 aa5.18□□□□□ -1.58
PDE1C-201ENST00000321453 LCE2AQ5TA79 106 aaPredicted RBP5.17□□□□□ -1.58
PDE1C-201ENST00000321453 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.58
PDE1C-201ENST00000321453 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
PDE1C-201ENST00000321453 SSPOA2VEC9 5147 aa5.13□□□□□ -1.59
PDE1C-201ENST00000321453 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
PDE1C-201ENST00000321453 MT1MQ8N339 61 aa5.04□□□□□ -1.6
PDE1C-201ENST00000321453 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.6
PDE1C-201ENST00000321453 KRTAP9-7A8MTY7 169 aa4.96□□□□□ -1.62
PDE1C-201ENST00000321453 KRTAP19-3Q7Z4W3 81 aa4.94□□□□□ -1.62
PDE1C-201ENST00000321453 PRM1P04553 51 aa4.9□□□□□ -1.62
PDE1C-201ENST00000321453 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
PDE1C-201ENST00000321453 KRTAP9-6A0A140TA67 174 aa4.85□□□□□ -1.63
PDE1C-201ENST00000321453 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
PDE1C-201ENST00000321453 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
PDE1C-201ENST00000321453 SYNE2Q8WXH0 6885 aaKnown RBP4.78□□□□□ -1.64
PDE1C-201ENST00000321453 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
PDE1C-201ENST00000321453 LCE3EQ5T5B0 92 aa4.76□□□□□ -1.65
PDE1C-201ENST00000321453 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
PDE1C-201ENST00000321453 MT1AP04731 61 aa4.7□□□□□ -1.66
PDE1C-201ENST00000321453 SPRR2FQ96RM1 72 aa4.68□□□□□ -1.66
PDE1C-201ENST00000321453 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
PDE1C-201ENST00000321453 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
PDE1C-201ENST00000321453 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
PDE1C-201ENST00000321453 MDN1Q9NU22 5596 aa4.51□□□□□ -1.69
PDE1C-201ENST00000321453 MACF1Q9UPN3 7388 aaKnown RBP4.49□□□□□ -1.69
PDE1C-201ENST00000321453 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
PDE1C-201ENST00000321453 LCE1AQ5T7P2 110 aa4.42□□□□□ -1.7
PDE1C-201ENST00000321453 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
PDE1C-201ENST00000321453 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
PDE1C-201ENST00000321453 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
PDE1C-201ENST00000321453 SPRR2EP22531 72 aa4.05□□□□□ -1.76
PDE1C-201ENST00000321453 SPRR2BP35325 72 aa4.05□□□□□ -1.76
PDE1C-201ENST00000321453 SPRR2AP35326 72 aa4.05□□□□□ -1.76
PDE1C-201ENST00000321453 MT3P25713 68 aa4.04□□□□□ -1.76
PDE1C-201ENST00000321453 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
PDE1C-201ENST00000321453 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
PDE1C-201ENST00000321453 NEBP20929 6669 aa3.88□□□□□ -1.79
PDE1C-201ENST00000321453 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
PDE1C-201ENST00000321453 KRTAP20-1Q3LI63 56 aa3.85□□□□□ -1.79
PDE1C-201ENST00000321453 SPRR2DP22532 72 aa3.83□□□□□ -1.8
PDE1C-201ENST00000321453 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
PDE1C-201ENST00000321453 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
PDE1C-201ENST00000321453 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.83
PDE1C-201ENST00000321453 MT4P47944 62 aa3.56□□□□□ -1.84
PDE1C-201ENST00000321453 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
PDE1C-201ENST00000321453 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
PDE1C-201ENST00000321453 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
PDE1C-201ENST00000321453 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
PDE1C-201ENST00000321453 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
PDE1C-201ENST00000321453 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
PDE1C-201ENST00000321453 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
PDE1C-201ENST00000321453 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
PDE1C-201ENST00000321453 LCE4AQ5TA78 99 aa3.26□□□□□ -1.89
PDE1C-201ENST00000321453 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
PDE1C-201ENST00000321453 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
PDE1C-201ENST00000321453 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
PDE1C-201ENST00000321453 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
PDE1C-201ENST00000321453 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
PDE1C-201ENST00000321453 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
PDE1C-201ENST00000321453 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
PDE1C-201ENST00000321453 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
PDE1C-201ENST00000321453 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
PDE1C-201ENST00000321453 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
PDE1C-201ENST00000321453 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
PDE1C-201ENST00000321453 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
PDE1C-201ENST00000321453 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
PDE1C-201ENST00000321453 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
PDE1C-201ENST00000321453 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
PDE1C-201ENST00000321453 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
PDE1C-201ENST00000321453 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
PDE1C-201ENST00000321453 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 60.8 ms