RNA–Protein interactions for RNA: ENST00000319921.4

RNF213-201, Transcript of ring finger protein 213, humanhuman

TSL 1 (best) BASIC

Gene RNF213, Length 5,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-201ENST00000319921 MT1MQ8N339 61 aa3.85□□□□□ -1.79
RNF213-201ENST00000319921 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.79
RNF213-201ENST00000319921 TNXBP22105 4242 aa3.84□□□□□ -1.79
RNF213-201ENST00000319921 MUC17Q685J3 4493 aa3.81□□□□□ -1.8
RNF213-201ENST00000319921 RNF213Q63HN8 5207 aa3.8□□□□□ -1.8
RNF213-201ENST00000319921 HMCN2Q8NDA2 5059 aa3.76□□□□□ -1.81
RNF213-201ENST00000319921 FSIP2Q5CZC0 6907 aa3.76□□□□□ -1.81
RNF213-201ENST00000319921 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.82
RNF213-201ENST00000319921 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
RNF213-201ENST00000319921 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
RNF213-201ENST00000319921 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
RNF213-201ENST00000319921 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
RNF213-201ENST00000319921 MT1AP04731 61 aa3.67□□□□□ -1.82
RNF213-201ENST00000319921 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
RNF213-201ENST00000319921 MT4P47944 62 aa3.64□□□□□ -1.83
RNF213-201ENST00000319921 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
RNF213-201ENST00000319921 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
RNF213-201ENST00000319921 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
RNF213-201ENST00000319921 MUC2Q02817 5179 aa3.57□□□□□ -1.84
RNF213-201ENST00000319921 PRM1P04553 51 aa3.54□□□□□ -1.84
RNF213-201ENST00000319921 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
RNF213-201ENST00000319921 LOC100996750A0A140TA64 210 aa3.51□□□□□ -1.85
RNF213-201ENST00000319921 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
RNF213-201ENST00000319921 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
RNF213-201ENST00000319921 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
RNF213-201ENST00000319921 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
RNF213-201ENST00000319921 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
RNF213-201ENST00000319921 LCE4AQ5TA78 99 aa3.46□□□□□ -1.85
RNF213-201ENST00000319921 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
RNF213-201ENST00000319921 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
RNF213-201ENST00000319921 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
RNF213-201ENST00000319921 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
RNF213-201ENST00000319921 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
RNF213-201ENST00000319921 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
RNF213-201ENST00000319921 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
RNF213-201ENST00000319921 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
RNF213-201ENST00000319921 USH2AO75445 5202 aa3.15□□□□□ -1.9
RNF213-201ENST00000319921 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
RNF213-201ENST00000319921 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
RNF213-201ENST00000319921 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
RNF213-201ENST00000319921 NEBP20929 6669 aa3.08□□□□□ -1.92
RNF213-201ENST00000319921 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
RNF213-201ENST00000319921 FCGBPQ9Y6R7 5405 aaPredicted RBP3.02□□□□□ -1.93
RNF213-201ENST00000319921 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
RNF213-201ENST00000319921 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
RNF213-201ENST00000319921 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
RNF213-201ENST00000319921 SSPOA2VEC9 5147 aa3□□□□□ -1.93
RNF213-201ENST00000319921 KMT2DO14686 5537 aa2.91□□□□□ -1.94
RNF213-201ENST00000319921 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
RNF213-201ENST00000319921 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.97
RNF213-201ENST00000319921 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
RNF213-201ENST00000319921 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
RNF213-201ENST00000319921 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
RNF213-201ENST00000319921 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
RNF213-201ENST00000319921 MDN1Q9NU22 5596 aa2.66□□□□□ -1.98
RNF213-201ENST00000319921 KRTAP4-6Q9BYQ5 205 aa2.65□□□□□ -1.99
RNF213-201ENST00000319921 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
RNF213-201ENST00000319921 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
RNF213-201ENST00000319921 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
RNF213-201ENST00000319921 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
RNF213-201ENST00000319921 KRTAP5-3Q6L8H2 238 aa2.34□□□□□ -2.03
RNF213-201ENST00000319921 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
RNF213-201ENST00000319921 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
RNF213-201ENST00000319921 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
RNF213-201ENST00000319921 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
RNF213-201ENST00000319921 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
RNF213-201ENST00000319921 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
RNF213-201ENST00000319921 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
RNF213-201ENST00000319921 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
RNF213-201ENST00000319921 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
RNF213-201ENST00000319921 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
RNF213-201ENST00000319921 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
RNF213-201ENST00000319921 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
RNF213-201ENST00000319921 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
RNF213-201ENST00000319921 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
RNF213-201ENST00000319921 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
RNF213-201ENST00000319921 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms