RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 KRTAP9-2Q9BYQ4 174 aa5.59□□□□□ -1.51
SHISA2-201ENST00000319420 MT1LQ93083 61 aa5.59□□□□□ -1.51
SHISA2-201ENST00000319420 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
SHISA2-201ENST00000319420 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
SHISA2-201ENST00000319420 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
SHISA2-201ENST00000319420 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
SHISA2-201ENST00000319420 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
SHISA2-201ENST00000319420 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
SHISA2-201ENST00000319420 KRTAP19-3Q7Z4W3 81 aa5.35□□□□□ -1.55
SHISA2-201ENST00000319420 MT1GP13640 62 aa5.33□□□□□ -1.56
SHISA2-201ENST00000319420 MT1MQ8N339 61 aa5.3□□□□□ -1.56
SHISA2-201ENST00000319420 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
SHISA2-201ENST00000319420 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
SHISA2-201ENST00000319420 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
SHISA2-201ENST00000319420 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
SHISA2-201ENST00000319420 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
SHISA2-201ENST00000319420 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
SHISA2-201ENST00000319420 SPRR2EP22531 72 aa5.07□□□□□ -1.6
SHISA2-201ENST00000319420 SPRR2BP35325 72 aa5.07□□□□□ -1.6
SHISA2-201ENST00000319420 SPRR2AP35326 72 aa5.07□□□□□ -1.6
SHISA2-201ENST00000319420 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
SHISA2-201ENST00000319420 KRTAP5-9P26371 169 aa5.02□□□□□ -1.61
SHISA2-201ENST00000319420 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
SHISA2-201ENST00000319420 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
SHISA2-201ENST00000319420 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.62
SHISA2-201ENST00000319420 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
SHISA2-201ENST00000319420 SPRR2DP22532 72 aa4.85□□□□□ -1.63
SHISA2-201ENST00000319420 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
SHISA2-201ENST00000319420 KRTAP6-3Q3LI67 103 aa4.79□□□□□ -1.64
SHISA2-201ENST00000319420 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
SHISA2-201ENST00000319420 MT1AP04731 61 aa4.65□□□□□ -1.67
SHISA2-201ENST00000319420 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
SHISA2-201ENST00000319420 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
SHISA2-201ENST00000319420 NEBP20929 6669 aa4.63□□□□□ -1.67
SHISA2-201ENST00000319420 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
SHISA2-201ENST00000319420 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
SHISA2-201ENST00000319420 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
SHISA2-201ENST00000319420 MT4P47944 62 aa4.39□□□□□ -1.71
SHISA2-201ENST00000319420 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
SHISA2-201ENST00000319420 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
SHISA2-201ENST00000319420 KRTAP4-6Q9BYQ5 205 aa4.32□□□□□ -1.72
SHISA2-201ENST00000319420 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
SHISA2-201ENST00000319420 MT3P25713 68 aa4.23□□□□□ -1.73
SHISA2-201ENST00000319420 HMCN1Q96RW7 5635 aa4.23□□□□□ -1.73
SHISA2-201ENST00000319420 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
SHISA2-201ENST00000319420 PRM1P04553 51 aa4.22□□□□□ -1.73
SHISA2-201ENST00000319420 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
SHISA2-201ENST00000319420 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
SHISA2-201ENST00000319420 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
SHISA2-201ENST00000319420 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
SHISA2-201ENST00000319420 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
SHISA2-201ENST00000319420 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
SHISA2-201ENST00000319420 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.8
SHISA2-201ENST00000319420 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
SHISA2-201ENST00000319420 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
SHISA2-201ENST00000319420 LCE1FQ5T754 118 aa3.53□□□□□ -1.85
SHISA2-201ENST00000319420 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
SHISA2-201ENST00000319420 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
SHISA2-201ENST00000319420 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
SHISA2-201ENST00000319420 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
SHISA2-201ENST00000319420 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
SHISA2-201ENST00000319420 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
SHISA2-201ENST00000319420 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
SHISA2-201ENST00000319420 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
SHISA2-201ENST00000319420 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
SHISA2-201ENST00000319420 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
SHISA2-201ENST00000319420 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
SHISA2-201ENST00000319420 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
SHISA2-201ENST00000319420 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
SHISA2-201ENST00000319420 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
SHISA2-201ENST00000319420 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
SHISA2-201ENST00000319420 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
SHISA2-201ENST00000319420 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
SHISA2-201ENST00000319420 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
SHISA2-201ENST00000319420 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
SHISA2-201ENST00000319420 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
SHISA2-201ENST00000319420 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 57.3 ms