RNA–Protein interactions for RNA: ENST00000319190.9

TTC7A-201, Transcript of tetratricopeptide repeat domain 7A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TTC7A, Length 5,157 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-201ENST00000319190 LCE2AQ5TA79 106 aaPredicted RBP6.74□□□□□ -1.33
TTC7A-201ENST00000319190 KRTAP9-2Q9BYQ4 174 aa6.72□□□□□ -1.33
TTC7A-201ENST00000319190 LCE3DQ9BYE3 92 aa6.7□□□□□ -1.34
TTC7A-201ENST00000319190 MT1MQ8N339 61 aa6.63□□□□□ -1.35
TTC7A-201ENST00000319190 LCE3EQ5T5B0 92 aa6.59□□□□□ -1.35
TTC7A-201ENST00000319190 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
TTC7A-201ENST00000319190 HMCN2Q8NDA2 5059 aa6.56□□□□□ -1.36
TTC7A-201ENST00000319190 KRTAP19-7Q3SYF9 63 aa6.45□□□□□ -1.38
TTC7A-201ENST00000319190 MUC2Q02817 5179 aa6.4□□□□□ -1.38
TTC7A-201ENST00000319190 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.39
TTC7A-201ENST00000319190 LOC100996750A0A140TA64 210 aa6.37□□□□□ -1.39
TTC7A-201ENST00000319190 MT3P25713 68 aa6.36□□□□□ -1.39
TTC7A-201ENST00000319190 KRTAP9-6A0A140TA67 174 aa6.32□□□□□ -1.4
TTC7A-201ENST00000319190 MT4P47944 62 aa6.27□□□□□ -1.41
TTC7A-201ENST00000319190 MT1AP04731 61 aa6.14□□□□□ -1.43
TTC7A-201ENST00000319190 LCE1AQ5T7P2 110 aa6.02□□□□□ -1.45
TTC7A-201ENST00000319190 OBSCNQ5VST9 7968 aa6.01□□□□□ -1.45
TTC7A-201ENST00000319190 SYNE2Q8WXH0 6885 aaKnown RBP6□□□□□ -1.45
TTC7A-201ENST00000319190 KRTAP9-7A8MTY7 169 aa5.98□□□□□ -1.45
TTC7A-201ENST00000319190 KRTAP2-3P0C7H8 128 aa5.97□□□□□ -1.45
TTC7A-201ENST00000319190 KRTAP2-4Q9BYR9 128 aa5.97□□□□□ -1.45
TTC7A-201ENST00000319190 KRTAP2-1Q9BYU5 128 aa5.97□□□□□ -1.45
TTC7A-201ENST00000319190 PRM1P04553 51 aa5.95□□□□□ -1.46
TTC7A-201ENST00000319190 KRTAP6-3Q3LI67 103 aa5.95□□□□□ -1.46
TTC7A-201ENST00000319190 LCE1DQ5T752 114 aa5.93□□□□□ -1.46
TTC7A-201ENST00000319190 LCE1BQ5T7P3 118 aa5.91□□□□□ -1.46
TTC7A-201ENST00000319190 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
TTC7A-201ENST00000319190 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
TTC7A-201ENST00000319190 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.85□□□□□ -1.47
TTC7A-201ENST00000319190 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
TTC7A-201ENST00000319190 KRTAP20-1Q3LI63 56 aa5.84□□□□□ -1.47
TTC7A-201ENST00000319190 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
TTC7A-201ENST00000319190 USH2AO75445 5202 aa5.76□□□□□ -1.49
TTC7A-201ENST00000319190 FCGBPQ9Y6R7 5405 aaPredicted RBP5.69□□□□□ -1.5
TTC7A-201ENST00000319190 KRTAP6-2Q3LI66 62 aa5.64□□□□□ -1.51
TTC7A-201ENST00000319190 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
TTC7A-201ENST00000319190 LCE4AQ5TA78 99 aa5.61□□□□□ -1.51
TTC7A-201ENST00000319190 KRTAP2-2Q9BYT5 123 aa5.56□□□□□ -1.52
TTC7A-201ENST00000319190 DSTQ03001 7570 aaKnown RBP5.56□□□□□ -1.52
TTC7A-201ENST00000319190 KMT2DO14686 5537 aa5.43□□□□□ -1.54
TTC7A-201ENST00000319190 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
TTC7A-201ENST00000319190 KRTAP5-9P26371 169 aa5.24□□□□□ -1.57
TTC7A-201ENST00000319190 SSPOA2VEC9 5147 aa5.23□□□□□ -1.57
TTC7A-201ENST00000319190 MUC12Q9UKN1 5478 aa5.19□□□□□ -1.58
TTC7A-201ENST00000319190 NEBP20929 6669 aa5.12□□□□□ -1.59
TTC7A-201ENST00000319190 MDN1Q9NU22 5596 aa5.08□□□□□ -1.6
TTC7A-201ENST00000319190 LCE1CQ5T751 118 aa4.92□□□□□ -1.62
TTC7A-201ENST00000319190 LCE1EQ5T753 118 aa4.92□□□□□ -1.62
TTC7A-201ENST00000319190 LCE1FQ5T754 118 aa4.92□□□□□ -1.62
TTC7A-201ENST00000319190 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
TTC7A-201ENST00000319190 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
TTC7A-201ENST00000319190 MUC19Q7Z5P9 8384 aa4.78□□□□□ -1.64
TTC7A-201ENST00000319190 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
TTC7A-201ENST00000319190 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
TTC7A-201ENST00000319190 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
TTC7A-201ENST00000319190 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
TTC7A-201ENST00000319190 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.7
TTC7A-201ENST00000319190 KRTAP4-4Q9BYR3 166 aa4.14□□□□□ -1.75
TTC7A-201ENST00000319190 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
TTC7A-201ENST00000319190 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
TTC7A-201ENST00000319190 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
TTC7A-201ENST00000319190 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
TTC7A-201ENST00000319190 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
TTC7A-201ENST00000319190 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
TTC7A-201ENST00000319190 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
TTC7A-201ENST00000319190 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
TTC7A-201ENST00000319190 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
TTC7A-201ENST00000319190 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
TTC7A-201ENST00000319190 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
TTC7A-201ENST00000319190 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
TTC7A-201ENST00000319190 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
TTC7A-201ENST00000319190 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
TTC7A-201ENST00000319190 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
TTC7A-201ENST00000319190 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
TTC7A-201ENST00000319190 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
TTC7A-201ENST00000319190 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
TTC7A-201ENST00000319190 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 25.3 ms