RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 UBR4Q5T4S7 5183 aa5.82□□□□□ -1.48
UBE2N-201ENST00000318066 KRTAP19-6Q3LI70 58 aa5.79□□□□□ -1.48
UBE2N-201ENST00000318066 RNF213Q63HN8 5207 aa5.78□□□□□ -1.48
UBE2N-201ENST00000318066 PRM1P04553 51 aa5.76□□□□□ -1.49
UBE2N-201ENST00000318066 FSIP2Q5CZC0 6907 aa5.75□□□□□ -1.49
UBE2N-201ENST00000318066 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
UBE2N-201ENST00000318066 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
UBE2N-201ENST00000318066 LCE2AQ5TA79 106 aaPredicted RBP5.65□□□□□ -1.5
UBE2N-201ENST00000318066 MT1AP04731 61 aa5.62□□□□□ -1.51
UBE2N-201ENST00000318066 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
UBE2N-201ENST00000318066 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
UBE2N-201ENST00000318066 KRTAP2-1Q9BYU5 128 aa5.6□□□□□ -1.51
UBE2N-201ENST00000318066 KRTAP19-7Q3SYF9 63 aa5.55□□□□□ -1.52
UBE2N-201ENST00000318066 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
UBE2N-201ENST00000318066 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
UBE2N-201ENST00000318066 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
UBE2N-201ENST00000318066 MT4P47944 62 aa5.46□□□□□ -1.54
UBE2N-201ENST00000318066 MUC2Q02817 5179 aa5.45□□□□□ -1.54
UBE2N-201ENST00000318066 LCE1BQ5T7P3 118 aa5.43□□□□□ -1.54
UBE2N-201ENST00000318066 LCE1DQ5T752 114 aa5.42□□□□□ -1.54
UBE2N-201ENST00000318066 LCE1AQ5T7P2 110 aa5.31□□□□□ -1.56
UBE2N-201ENST00000318066 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
UBE2N-201ENST00000318066 KRTAP4-9Q9BYQ8 210 aa5.15□□□□□ -1.58
UBE2N-201ENST00000318066 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.59
UBE2N-201ENST00000318066 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
UBE2N-201ENST00000318066 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
UBE2N-201ENST00000318066 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
UBE2N-201ENST00000318066 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
UBE2N-201ENST00000318066 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
UBE2N-201ENST00000318066 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
UBE2N-201ENST00000318066 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
UBE2N-201ENST00000318066 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
UBE2N-201ENST00000318066 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
UBE2N-201ENST00000318066 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
UBE2N-201ENST00000318066 USH2AO75445 5202 aa4.91□□□□□ -1.62
UBE2N-201ENST00000318066 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.63
UBE2N-201ENST00000318066 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.82□□□□□ -1.64
UBE2N-201ENST00000318066 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
UBE2N-201ENST00000318066 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
UBE2N-201ENST00000318066 KMT2DO14686 5537 aa4.74□□□□□ -1.65
UBE2N-201ENST00000318066 LCE1CQ5T751 118 aa4.61□□□□□ -1.67
UBE2N-201ENST00000318066 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
UBE2N-201ENST00000318066 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
UBE2N-201ENST00000318066 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
UBE2N-201ENST00000318066 MUC12Q9UKN1 5478 aa4.49□□□□□ -1.69
UBE2N-201ENST00000318066 SSPOA2VEC9 5147 aa4.47□□□□□ -1.69
UBE2N-201ENST00000318066 KRTAP5-9P26371 169 aa4.37□□□□□ -1.71
UBE2N-201ENST00000318066 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
UBE2N-201ENST00000318066 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
UBE2N-201ENST00000318066 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
UBE2N-201ENST00000318066 NEBP20929 6669 aa4.22□□□□□ -1.73
UBE2N-201ENST00000318066 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.74
UBE2N-201ENST00000318066 MUC19Q7Z5P9 8384 aa4.14□□□□□ -1.75
UBE2N-201ENST00000318066 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
UBE2N-201ENST00000318066 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
UBE2N-201ENST00000318066 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
UBE2N-201ENST00000318066 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
UBE2N-201ENST00000318066 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
UBE2N-201ENST00000318066 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
UBE2N-201ENST00000318066 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
UBE2N-201ENST00000318066 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
UBE2N-201ENST00000318066 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
UBE2N-201ENST00000318066 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.87
UBE2N-201ENST00000318066 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
UBE2N-201ENST00000318066 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
UBE2N-201ENST00000318066 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
UBE2N-201ENST00000318066 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
UBE2N-201ENST00000318066 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
UBE2N-201ENST00000318066 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
UBE2N-201ENST00000318066 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
UBE2N-201ENST00000318066 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
UBE2N-201ENST00000318066 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
UBE2N-201ENST00000318066 PHGR1C9JFL3 82 aa2.65□□□□□ -1.98
UBE2N-201ENST00000318066 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
UBE2N-201ENST00000318066 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
UBE2N-201ENST00000318066 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
UBE2N-201ENST00000318066 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms