RNA–Protein interactions for RNA: ENST00000316843.8

LLGL1-201, Transcript of LLGL1, scribble cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LLGL1, Length 4,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LLGL1-201ENST00000316843 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.64
LLGL1-201ENST00000316843 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
LLGL1-201ENST00000316843 LOC100996750A0A140TA64 210 aa4.81□□□□□ -1.64
LLGL1-201ENST00000316843 MUC12Q9UKN1 5478 aa4.74□□□□□ -1.65
LLGL1-201ENST00000316843 SSPOA2VEC9 5147 aa4.7□□□□□ -1.66
LLGL1-201ENST00000316843 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
LLGL1-201ENST00000316843 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
LLGL1-201ENST00000316843 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
LLGL1-201ENST00000316843 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
LLGL1-201ENST00000316843 KRTAP2-3P0C7H8 128 aa4.63□□□□□ -1.67
LLGL1-201ENST00000316843 KRTAP2-4Q9BYR9 128 aa4.63□□□□□ -1.67
LLGL1-201ENST00000316843 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
LLGL1-201ENST00000316843 KRTAP19-6Q3LI70 58 aa4.62□□□□□ -1.67
LLGL1-201ENST00000316843 MT1MQ8N339 61 aa4.59□□□□□ -1.67
LLGL1-201ENST00000316843 SYNE2Q8WXH0 6885 aaKnown RBP4.56□□□□□ -1.68
LLGL1-201ENST00000316843 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
LLGL1-201ENST00000316843 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
LLGL1-201ENST00000316843 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
LLGL1-201ENST00000316843 SPRR2EP22531 72 aa4.35□□□□□ -1.71
LLGL1-201ENST00000316843 SPRR2BP35325 72 aa4.35□□□□□ -1.71
LLGL1-201ENST00000316843 SPRR2AP35326 72 aa4.35□□□□□ -1.71
LLGL1-201ENST00000316843 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
LLGL1-201ENST00000316843 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
LLGL1-201ENST00000316843 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
LLGL1-201ENST00000316843 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
LLGL1-201ENST00000316843 MDN1Q9NU22 5596 aa4.16□□□□□ -1.74
LLGL1-201ENST00000316843 SPRR2DP22532 72 aa4.14□□□□□ -1.75
LLGL1-201ENST00000316843 KRTAP9-2Q9BYQ4 174 aa4.14□□□□□ -1.75
LLGL1-201ENST00000316843 MT1AP04731 61 aa4.1□□□□□ -1.75
LLGL1-201ENST00000316843 PRM1P04553 51 aa4.09□□□□□ -1.75
LLGL1-201ENST00000316843 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
LLGL1-201ENST00000316843 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
LLGL1-201ENST00000316843 MT3P25713 68 aa3.89□□□□□ -1.79
LLGL1-201ENST00000316843 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
LLGL1-201ENST00000316843 KRTAP9-4Q9BYQ2 154 aa3.83□□□□□ -1.8
LLGL1-201ENST00000316843 MT4P47944 62 aa3.82□□□□□ -1.8
LLGL1-201ENST00000316843 KRTAP5-9P26371 169 aa3.74□□□□□ -1.81
LLGL1-201ENST00000316843 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
LLGL1-201ENST00000316843 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
LLGL1-201ENST00000316843 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
LLGL1-201ENST00000316843 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
LLGL1-201ENST00000316843 KRTAP9-6A0A140TA67 174 aa3.55□□□□□ -1.84
LLGL1-201ENST00000316843 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.85
LLGL1-201ENST00000316843 KRTAP4-6Q9BYQ5 205 aa3.51□□□□□ -1.85
LLGL1-201ENST00000316843 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
LLGL1-201ENST00000316843 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
LLGL1-201ENST00000316843 NEBP20929 6669 aa3.33□□□□□ -1.88
LLGL1-201ENST00000316843 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
LLGL1-201ENST00000316843 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
LLGL1-201ENST00000316843 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
LLGL1-201ENST00000316843 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
LLGL1-201ENST00000316843 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
LLGL1-201ENST00000316843 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
LLGL1-201ENST00000316843 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
LLGL1-201ENST00000316843 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
LLGL1-201ENST00000316843 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
LLGL1-201ENST00000316843 KRTAP5-3Q6L8H2 238 aa2.85□□□□□ -1.95
LLGL1-201ENST00000316843 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
LLGL1-201ENST00000316843 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
LLGL1-201ENST00000316843 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
LLGL1-201ENST00000316843 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
LLGL1-201ENST00000316843 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
LLGL1-201ENST00000316843 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
LLGL1-201ENST00000316843 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
LLGL1-201ENST00000316843 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
LLGL1-201ENST00000316843 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
LLGL1-201ENST00000316843 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
LLGL1-201ENST00000316843 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
LLGL1-201ENST00000316843 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
LLGL1-201ENST00000316843 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
LLGL1-201ENST00000316843 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
LLGL1-201ENST00000316843 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
LLGL1-201ENST00000316843 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
LLGL1-201ENST00000316843 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
LLGL1-201ENST00000316843 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
LLGL1-201ENST00000316843 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
LLGL1-201ENST00000316843 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 111.2 ms