RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 KRTAP19-7Q3SYF9 63 aa7□□□□□ -1.29
AP3S1-201ENST00000316788 KRTAP9-7A8MTY7 169 aa6.85□□□□□ -1.31
AP3S1-201ENST00000316788 LOC100996750A0A140TA64 210 aa6.83□□□□□ -1.32
AP3S1-201ENST00000316788 MT1EP04732 61 aa6.83□□□□□ -1.32
AP3S1-201ENST00000316788 KRTAP4-6Q9BYQ5 205 aa6.83□□□□□ -1.32
AP3S1-201ENST00000316788 MT1LQ93083 61 aa6.81□□□□□ -1.32
AP3S1-201ENST00000316788 KRTAP9-6A8MVA2 160 aa6.81□□□□□ -1.32
AP3S1-201ENST00000316788 MUC12Q9UKN1 5478 aa6.75□□□□□ -1.33
AP3S1-201ENST00000316788 KRTAP6-3Q3LI67 103 aa6.75□□□□□ -1.33
AP3S1-201ENST00000316788 KRTAP2-3P0C7H8 128 aa6.69□□□□□ -1.34
AP3S1-201ENST00000316788 KRTAP2-4Q9BYR9 128 aa6.69□□□□□ -1.34
AP3S1-201ENST00000316788 KRTAP2-1Q9BYU5 128 aa6.69□□□□□ -1.34
AP3S1-201ENST00000316788 KRTAP5-9P26371 169 aa6.67□□□□□ -1.34
AP3S1-201ENST00000316788 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
AP3S1-201ENST00000316788 SPRR2FQ96RM1 72 aa6.63□□□□□ -1.35
AP3S1-201ENST00000316788 MDN1Q9NU22 5596 aa6.62□□□□□ -1.35
AP3S1-201ENST00000316788 NEBP20929 6669 aa6.47□□□□□ -1.37
AP3S1-201ENST00000316788 MT1GP13640 62 aa6.42□□□□□ -1.38
AP3S1-201ENST00000316788 KRTAP19-3Q7Z4W3 81 aa6.41□□□□□ -1.38
AP3S1-201ENST00000316788 SPRR2EP22531 72 aa6.4□□□□□ -1.38
AP3S1-201ENST00000316788 SPRR2BP35325 72 aa6.4□□□□□ -1.38
AP3S1-201ENST00000316788 SPRR2AP35326 72 aa6.4□□□□□ -1.38
AP3S1-201ENST00000316788 LCE1AQ5T7P2 110 aa6.4□□□□□ -1.38
AP3S1-201ENST00000316788 MT1MQ8N339 61 aa6.38□□□□□ -1.39
AP3S1-201ENST00000316788 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
AP3S1-201ENST00000316788 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
AP3S1-201ENST00000316788 SPRR2DP22532 72 aa6.17□□□□□ -1.42
AP3S1-201ENST00000316788 DSTQ03001 7570 aaKnown RBP6.09□□□□□ -1.44
AP3S1-201ENST00000316788 KRTAP20-1Q3LI63 56 aa6.02□□□□□ -1.45
AP3S1-201ENST00000316788 LCE3BQ5TA77 95 aa5.96□□□□□ -1.45
AP3S1-201ENST00000316788 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
AP3S1-201ENST00000316788 MT1AP04731 61 aa5.79□□□□□ -1.48
AP3S1-201ENST00000316788 KRTAP12-4P60329 112 aa5.78□□□□□ -1.48
AP3S1-201ENST00000316788 KRTAP6-1Q3LI64 71 aa5.71□□□□□ -1.49
AP3S1-201ENST00000316788 KRTAP5-5Q701N2 237 aaPredicted RBP5.7□□□□□ -1.5
AP3S1-201ENST00000316788 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
AP3S1-201ENST00000316788 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
AP3S1-201ENST00000316788 LCE3DQ9BYE3 92 aa5.5□□□□□ -1.53
AP3S1-201ENST00000316788 KRTAP5-4Q6L8H1 288 aa5.47□□□□□ -1.53
AP3S1-201ENST00000316788 LCE3EQ5T5B0 92 aa5.44□□□□□ -1.54
AP3S1-201ENST00000316788 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
AP3S1-201ENST00000316788 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
AP3S1-201ENST00000316788 MT4P47944 62 aa5.41□□□□□ -1.54
AP3S1-201ENST00000316788 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
AP3S1-201ENST00000316788 KRTAP9-9Q9BYP9 154 aa5.37□□□□□ -1.55
AP3S1-201ENST00000316788 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
AP3S1-201ENST00000316788 HMCN1Q96RW7 5635 aa5.36□□□□□ -1.55
AP3S1-201ENST00000316788 KRTAP4-2Q9BYR5 136 aa5.23□□□□□ -1.57
AP3S1-201ENST00000316788 MT3P25713 68 aa5.19□□□□□ -1.58
AP3S1-201ENST00000316788 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.58
AP3S1-201ENST00000316788 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
AP3S1-201ENST00000316788 PRM1P04553 51 aa5.09□□□□□ -1.59
AP3S1-201ENST00000316788 KRTAP4-12Q9BQ66 201 aa5□□□□□ -1.61
AP3S1-201ENST00000316788 AHNAK2Q8IVF2 5795 aa4.94□□□□□ -1.62
AP3S1-201ENST00000316788 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
AP3S1-201ENST00000316788 GPR98Q8WXG9 6306 aa4.78□□□□□ -1.64
AP3S1-201ENST00000316788 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
AP3S1-201ENST00000316788 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
AP3S1-201ENST00000316788 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
AP3S1-201ENST00000316788 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
AP3S1-201ENST00000316788 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
AP3S1-201ENST00000316788 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
AP3S1-201ENST00000316788 KRTAP5-1Q6L8H4 278 aa4.32□□□□□ -1.72
AP3S1-201ENST00000316788 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
AP3S1-201ENST00000316788 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
AP3S1-201ENST00000316788 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
AP3S1-201ENST00000316788 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
AP3S1-201ENST00000316788 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
AP3S1-201ENST00000316788 AHNAKQ09666 5890 aaKnown RBP3.86□□□□□ -1.79
AP3S1-201ENST00000316788 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
AP3S1-201ENST00000316788 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
AP3S1-201ENST00000316788 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
AP3S1-201ENST00000316788 KRTAP21-1Q3LI58 79 aa3.29□□□□□ -1.88
AP3S1-201ENST00000316788 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
AP3S1-201ENST00000316788 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
AP3S1-201ENST00000316788 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
AP3S1-201ENST00000316788 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 81.8 ms