RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 KRTAP5-9P26371 169 aa5.98□□□□□ -1.45
TUBB3-201ENST00000315491 SPRR2FQ96RM1 72 aa5.98□□□□□ -1.45
TUBB3-201ENST00000315491 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
TUBB3-201ENST00000315491 MT1EP04732 61 aa5.92□□□□□ -1.46
TUBB3-201ENST00000315491 MUC12Q9UKN1 5478 aa5.82□□□□□ -1.48
TUBB3-201ENST00000315491 MT1LQ93083 61 aa5.76□□□□□ -1.49
TUBB3-201ENST00000315491 LCE1AQ5T7P2 110 aa5.75□□□□□ -1.49
TUBB3-201ENST00000315491 SPRR2EP22531 72 aa5.74□□□□□ -1.49
TUBB3-201ENST00000315491 SPRR2BP35325 72 aa5.74□□□□□ -1.49
TUBB3-201ENST00000315491 SPRR2AP35326 72 aa5.74□□□□□ -1.49
TUBB3-201ENST00000315491 KRTAP19-3Q7Z4W3 81 aa5.74□□□□□ -1.49
TUBB3-201ENST00000315491 MDN1Q9NU22 5596 aa5.73□□□□□ -1.49
TUBB3-201ENST00000315491 NEBP20929 6669 aa5.68□□□□□ -1.5
TUBB3-201ENST00000315491 MT1GP13640 62 aa5.66□□□□□ -1.5
TUBB3-201ENST00000315491 LCE5AQ5TCM9 118 aa5.66□□□□□ -1.5
TUBB3-201ENST00000315491 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
TUBB3-201ENST00000315491 MT1MQ8N339 61 aa5.59□□□□□ -1.51
TUBB3-201ENST00000315491 SPRR2DP22532 72 aa5.54□□□□□ -1.52
TUBB3-201ENST00000315491 LCE3CQ5T5A8 94 aa5.54□□□□□ -1.52
TUBB3-201ENST00000315491 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
TUBB3-201ENST00000315491 KRTAP4-3Q9BYR4 195 aa5.45□□□□□ -1.54
TUBB3-201ENST00000315491 LCE3BQ5TA77 95 aa5.34□□□□□ -1.56
TUBB3-201ENST00000315491 DSTQ03001 7570 aaKnown RBP5.3□□□□□ -1.56
TUBB3-201ENST00000315491 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
TUBB3-201ENST00000315491 KRTAP2-4Q9BYR9 128 aa5.3□□□□□ -1.56
TUBB3-201ENST00000315491 KRTAP20-1Q3LI63 56 aa5.28□□□□□ -1.56
TUBB3-201ENST00000315491 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
TUBB3-201ENST00000315491 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
TUBB3-201ENST00000315491 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
TUBB3-201ENST00000315491 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
TUBB3-201ENST00000315491 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
TUBB3-201ENST00000315491 KRTAP5-4Q6L8H1 288 aa4.95□□□□□ -1.62
TUBB3-201ENST00000315491 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
TUBB3-201ENST00000315491 MT1AP04731 61 aa4.91□□□□□ -1.62
TUBB3-201ENST00000315491 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
TUBB3-201ENST00000315491 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.63
TUBB3-201ENST00000315491 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
TUBB3-201ENST00000315491 MT4P47944 62 aa4.81□□□□□ -1.64
TUBB3-201ENST00000315491 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
TUBB3-201ENST00000315491 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
TUBB3-201ENST00000315491 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
TUBB3-201ENST00000315491 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
TUBB3-201ENST00000315491 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
TUBB3-201ENST00000315491 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
TUBB3-201ENST00000315491 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
TUBB3-201ENST00000315491 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
TUBB3-201ENST00000315491 MT3P25713 68 aa4.46□□□□□ -1.7
TUBB3-201ENST00000315491 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
TUBB3-201ENST00000315491 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
TUBB3-201ENST00000315491 AHNAK2Q8IVF2 5795 aa4.28□□□□□ -1.72
TUBB3-201ENST00000315491 LCE3EQ5T5B0 92 aa4.16□□□□□ -1.74
TUBB3-201ENST00000315491 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
TUBB3-201ENST00000315491 PRM1P04553 51 aa4.12□□□□□ -1.75
TUBB3-201ENST00000315491 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
TUBB3-201ENST00000315491 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
TUBB3-201ENST00000315491 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
TUBB3-201ENST00000315491 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
TUBB3-201ENST00000315491 KRTAP5-7Q6L8G8 165 aa3.93□□□□□ -1.78
TUBB3-201ENST00000315491 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
TUBB3-201ENST00000315491 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
TUBB3-201ENST00000315491 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
TUBB3-201ENST00000315491 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
TUBB3-201ENST00000315491 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
TUBB3-201ENST00000315491 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
TUBB3-201ENST00000315491 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
TUBB3-201ENST00000315491 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
TUBB3-201ENST00000315491 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
TUBB3-201ENST00000315491 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
TUBB3-201ENST00000315491 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
TUBB3-201ENST00000315491 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
TUBB3-201ENST00000315491 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
TUBB3-201ENST00000315491 LCE1FQ5T754 118 aa3□□□□□ -1.93
TUBB3-201ENST00000315491 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.96
TUBB3-201ENST00000315491 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
TUBB3-201ENST00000315491 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
TUBB3-201ENST00000315491 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
TUBB3-201ENST00000315491 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 86 ms