RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 MT1GP13640 62 aa3.5□□□□□ -1.85
GPHN-201ENST00000315266 MUC12Q9UKN1 5478 aa3.49□□□□□ -1.85
GPHN-201ENST00000315266 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
GPHN-201ENST00000315266 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
GPHN-201ENST00000315266 SPRR2EP22531 72 aa3.44□□□□□ -1.86
GPHN-201ENST00000315266 SPRR2BP35325 72 aa3.44□□□□□ -1.86
GPHN-201ENST00000315266 SPRR2AP35326 72 aa3.44□□□□□ -1.86
GPHN-201ENST00000315266 KRTAP9-6A0A140TA67 174 aa3.4□□□□□ -1.87
GPHN-201ENST00000315266 KRTAP19-4Q3LI73 84 aa3.4□□□□□ -1.87
GPHN-201ENST00000315266 MT1EP04732 61 aa3.38□□□□□ -1.87
GPHN-201ENST00000315266 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
GPHN-201ENST00000315266 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
GPHN-201ENST00000315266 LOC100996750A0A140TA64 210 aa3.37□□□□□ -1.87
GPHN-201ENST00000315266 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
GPHN-201ENST00000315266 MT1LQ93083 61 aa3.33□□□□□ -1.88
GPHN-201ENST00000315266 KRTAP19-3Q7Z4W3 81 aa3.3□□□□□ -1.88
GPHN-201ENST00000315266 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
GPHN-201ENST00000315266 SPRR2DP22532 72 aa3.28□□□□□ -1.88
GPHN-201ENST00000315266 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
GPHN-201ENST00000315266 MT1MQ8N339 61 aa3.21□□□□□ -1.9
GPHN-201ENST00000315266 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
GPHN-201ENST00000315266 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
GPHN-201ENST00000315266 KRTAP5-9P26371 169 aa3.15□□□□□ -1.91
GPHN-201ENST00000315266 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
GPHN-201ENST00000315266 LCE5AQ5TCM9 118 aa3.14□□□□□ -1.91
GPHN-201ENST00000315266 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
GPHN-201ENST00000315266 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
GPHN-201ENST00000315266 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
GPHN-201ENST00000315266 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
GPHN-201ENST00000315266 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
GPHN-201ENST00000315266 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
GPHN-201ENST00000315266 MT4P47944 62 aa3.1□□□□□ -1.91
GPHN-201ENST00000315266 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
GPHN-201ENST00000315266 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.94
GPHN-201ENST00000315266 NEBP20929 6669 aa2.89□□□□□ -1.95
GPHN-201ENST00000315266 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
GPHN-201ENST00000315266 MT1AP04731 61 aa2.86□□□□□ -1.95
GPHN-201ENST00000315266 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.95
GPHN-201ENST00000315266 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
GPHN-201ENST00000315266 PRM1P04553 51 aa2.82□□□□□ -1.96
GPHN-201ENST00000315266 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
GPHN-201ENST00000315266 LCE1DQ5T752 114 aa2.79□□□□□ -1.96
GPHN-201ENST00000315266 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
GPHN-201ENST00000315266 MT3P25713 68 aa2.78□□□□□ -1.96
GPHN-201ENST00000315266 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
GPHN-201ENST00000315266 LCE4AQ5TA78 99 aa2.74□□□□□ -1.97
GPHN-201ENST00000315266 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
GPHN-201ENST00000315266 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
GPHN-201ENST00000315266 KRTAP4-6Q9BYQ5 205 aa2.65□□□□□ -1.98
GPHN-201ENST00000315266 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
GPHN-201ENST00000315266 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
GPHN-201ENST00000315266 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
GPHN-201ENST00000315266 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
GPHN-201ENST00000315266 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
GPHN-201ENST00000315266 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
GPHN-201ENST00000315266 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
GPHN-201ENST00000315266 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
GPHN-201ENST00000315266 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
GPHN-201ENST00000315266 LCE1FQ5T754 118 aa2.28□□□□□ -2.05
GPHN-201ENST00000315266 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
GPHN-201ENST00000315266 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
GPHN-201ENST00000315266 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
GPHN-201ENST00000315266 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
GPHN-201ENST00000315266 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
GPHN-201ENST00000315266 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
GPHN-201ENST00000315266 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
GPHN-201ENST00000315266 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
GPHN-201ENST00000315266 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
GPHN-201ENST00000315266 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
GPHN-201ENST00000315266 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
GPHN-201ENST00000315266 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
GPHN-201ENST00000315266 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
GPHN-201ENST00000315266 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
GPHN-201ENST00000315266 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
GPHN-201ENST00000315266 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
GPHN-201ENST00000315266 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
GPHN-201ENST00000315266 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms