RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 KMT2CQ8NEZ4 4911 aaKnown RBP6.45□□□□□ -1.38
KDM3B-201ENST00000314358 KRTAP19-6Q3LI70 58 aa6.42□□□□□ -1.38
KDM3B-201ENST00000314358 MT3P25713 68 aa6.39□□□□□ -1.39
KDM3B-201ENST00000314358 MT1MQ8N339 61 aa6.36□□□□□ -1.39
KDM3B-201ENST00000314358 FLGP20930 4061 aaPredicted RBP6.35□□□□□ -1.39
KDM3B-201ENST00000314358 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
KDM3B-201ENST00000314358 ABCA13Q86UQ4 5058 aa6.31□□□□□ -1.4
KDM3B-201ENST00000314358 EPPK1P58107 5090 aaKnown RBP6.29□□□□□ -1.4
KDM3B-201ENST00000314358 KRTAP9-6A0A140TA67 174 aa6.22□□□□□ -1.41
KDM3B-201ENST00000314358 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
KDM3B-201ENST00000314358 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.42
KDM3B-201ENST00000314358 FAT4Q6V0I7 4981 aa6.07□□□□□ -1.44
KDM3B-201ENST00000314358 RNF213Q63HN8 5207 aa6.04□□□□□ -1.44
KDM3B-201ENST00000314358 KRTAP20-1Q3LI63 56 aa6.03□□□□□ -1.44
KDM3B-201ENST00000314358 SYNE2Q8WXH0 6885 aaKnown RBP6□□□□□ -1.45
KDM3B-201ENST00000314358 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
KDM3B-201ENST00000314358 KRTAP2-3P0C7H8 128 aa5.9□□□□□ -1.47
KDM3B-201ENST00000314358 KRTAP2-4Q9BYR9 128 aa5.9□□□□□ -1.47
KDM3B-201ENST00000314358 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.47
KDM3B-201ENST00000314358 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
KDM3B-201ENST00000314358 MT1AP04731 61 aa5.87□□□□□ -1.47
KDM3B-201ENST00000314358 HMCN2Q8NDA2 5059 aa5.85□□□□□ -1.47
KDM3B-201ENST00000314358 UBR4Q5T4S7 5183 aa5.83□□□□□ -1.48
KDM3B-201ENST00000314358 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
KDM3B-201ENST00000314358 KRTAP6-2Q3LI66 62 aa5.75□□□□□ -1.49
KDM3B-201ENST00000314358 LCE1CQ5T751 118 aa5.74□□□□□ -1.49
KDM3B-201ENST00000314358 LCE1EQ5T753 118 aa5.74□□□□□ -1.49
KDM3B-201ENST00000314358 LCE1FQ5T754 118 aa5.74□□□□□ -1.49
KDM3B-201ENST00000314358 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
KDM3B-201ENST00000314358 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
KDM3B-201ENST00000314358 KRTAP6-3Q3LI67 103 aa5.71□□□□□ -1.5
KDM3B-201ENST00000314358 KRTAP6-1Q3LI64 71 aa5.67□□□□□ -1.5
KDM3B-201ENST00000314358 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
KDM3B-201ENST00000314358 MUC2Q02817 5179 aa5.58□□□□□ -1.52
KDM3B-201ENST00000314358 KRTAP9-6A8MVA2 160 aa5.47□□□□□ -1.53
KDM3B-201ENST00000314358 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.53
KDM3B-201ENST00000314358 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
KDM3B-201ENST00000314358 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.55
KDM3B-201ENST00000314358 KRTAP2-2Q9BYT5 123 aa5.37□□□□□ -1.55
KDM3B-201ENST00000314358 KRTAP4-11Q9BYQ6 195 aa5.01□□□□□ -1.61
KDM3B-201ENST00000314358 USH2AO75445 5202 aa5□□□□□ -1.61
KDM3B-201ENST00000314358 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
KDM3B-201ENST00000314358 FCGBPQ9Y6R7 5405 aaPredicted RBP4.83□□□□□ -1.64
KDM3B-201ENST00000314358 KRTAP5-9P26371 169 aa4.82□□□□□ -1.64
KDM3B-201ENST00000314358 NEBP20929 6669 aa4.78□□□□□ -1.64
KDM3B-201ENST00000314358 KRTAP4-6Q9BYQ5 205 aa4.77□□□□□ -1.65
KDM3B-201ENST00000314358 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
KDM3B-201ENST00000314358 KRTAP20-2Q3LI61 65 aa4.75□□□□□ -1.65
KDM3B-201ENST00000314358 MACF1Q9UPN3 7388 aaKnown RBP4.74□□□□□ -1.65
KDM3B-201ENST00000314358 KRTAP4-4Q9BYR3 166 aa4.73□□□□□ -1.65
KDM3B-201ENST00000314358 KMT2DO14686 5537 aa4.73□□□□□ -1.65
KDM3B-201ENST00000314358 SSPOA2VEC9 5147 aa4.68□□□□□ -1.66
KDM3B-201ENST00000314358 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.68
KDM3B-201ENST00000314358 KRTAP4-2Q9BYR5 136 aa4.59□□□□□ -1.68
KDM3B-201ENST00000314358 MUC19Q7Z5P9 8384 aa4.38□□□□□ -1.71
KDM3B-201ENST00000314358 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
KDM3B-201ENST00000314358 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
KDM3B-201ENST00000314358 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
KDM3B-201ENST00000314358 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
KDM3B-201ENST00000314358 GPR98Q8WXG9 6306 aa3.88□□□□□ -1.79
KDM3B-201ENST00000314358 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
KDM3B-201ENST00000314358 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
KDM3B-201ENST00000314358 KRTAP5-8O75690 187 aa3.44□□□□□ -1.86
KDM3B-201ENST00000314358 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
KDM3B-201ENST00000314358 PHGR1C9JFL3 82 aa3.36□□□□□ -1.87
KDM3B-201ENST00000314358 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
KDM3B-201ENST00000314358 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
KDM3B-201ENST00000314358 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
KDM3B-201ENST00000314358 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
KDM3B-201ENST00000314358 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
KDM3B-201ENST00000314358 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.94
KDM3B-201ENST00000314358 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
KDM3B-201ENST00000314358 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
KDM3B-201ENST00000314358 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
KDM3B-201ENST00000314358 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
KDM3B-201ENST00000314358 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
KDM3B-201ENST00000314358 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 92.5 ms