RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 MT1LQ93083 61 aa4.66□□□□□ -1.66
DDX54-202ENST00000314045 KRTAP19-3Q7Z4W3 81 aa4.65□□□□□ -1.66
DDX54-202ENST00000314045 SPRR2DP22532 72 aa4.62□□□□□ -1.67
DDX54-202ENST00000314045 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
DDX54-202ENST00000314045 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
DDX54-202ENST00000314045 USH2AO75445 5202 aa4.48□□□□□ -1.69
DDX54-202ENST00000314045 MT1MQ8N339 61 aa4.48□□□□□ -1.69
DDX54-202ENST00000314045 LCE3BQ5TA77 95 aa4.48□□□□□ -1.69
DDX54-202ENST00000314045 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.69
DDX54-202ENST00000314045 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
DDX54-202ENST00000314045 KRTAP12-4P60329 112 aa4.4□□□□□ -1.71
DDX54-202ENST00000314045 KRTAP4-3Q9BYR4 195 aa4.4□□□□□ -1.71
DDX54-202ENST00000314045 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
DDX54-202ENST00000314045 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.71
DDX54-202ENST00000314045 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
DDX54-202ENST00000314045 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
DDX54-202ENST00000314045 KMT2DO14686 5537 aa4.21□□□□□ -1.74
DDX54-202ENST00000314045 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.19□□□□□ -1.74
DDX54-202ENST00000314045 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
DDX54-202ENST00000314045 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
DDX54-202ENST00000314045 KRTAP9-7A8MTY7 169 aa4.18□□□□□ -1.74
DDX54-202ENST00000314045 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
DDX54-202ENST00000314045 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
DDX54-202ENST00000314045 LCE5AQ5TCM9 118 aa4.15□□□□□ -1.75
DDX54-202ENST00000314045 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
DDX54-202ENST00000314045 MT4P47944 62 aa4.11□□□□□ -1.75
DDX54-202ENST00000314045 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.76
DDX54-202ENST00000314045 MT1AP04731 61 aa4.07□□□□□ -1.76
DDX54-202ENST00000314045 MT3P25713 68 aa4.06□□□□□ -1.76
DDX54-202ENST00000314045 MUC12Q9UKN1 5478 aa4.03□□□□□ -1.76
DDX54-202ENST00000314045 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
DDX54-202ENST00000314045 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
DDX54-202ENST00000314045 KRTAP2-1Q9BYU5 128 aa3.99□□□□□ -1.77
DDX54-202ENST00000314045 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
DDX54-202ENST00000314045 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
DDX54-202ENST00000314045 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
DDX54-202ENST00000314045 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
DDX54-202ENST00000314045 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
DDX54-202ENST00000314045 MDN1Q9NU22 5596 aa3.79□□□□□ -1.8
DDX54-202ENST00000314045 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
DDX54-202ENST00000314045 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
DDX54-202ENST00000314045 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
DDX54-202ENST00000314045 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
DDX54-202ENST00000314045 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
DDX54-202ENST00000314045 PRM1P04553 51 aa3.65□□□□□ -1.82
DDX54-202ENST00000314045 NEBP20929 6669 aa3.63□□□□□ -1.83
DDX54-202ENST00000314045 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.84
DDX54-202ENST00000314045 KRTAP4-6Q9BYQ5 205 aa3.47□□□□□ -1.85
DDX54-202ENST00000314045 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
DDX54-202ENST00000314045 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
DDX54-202ENST00000314045 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
DDX54-202ENST00000314045 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
DDX54-202ENST00000314045 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
DDX54-202ENST00000314045 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
DDX54-202ENST00000314045 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
DDX54-202ENST00000314045 LCE1CQ5T751 118 aa3□□□□□ -1.93
DDX54-202ENST00000314045 LCE1EQ5T753 118 aa3□□□□□ -1.93
DDX54-202ENST00000314045 LCE1FQ5T754 118 aa3□□□□□ -1.93
DDX54-202ENST00000314045 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
DDX54-202ENST00000314045 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
DDX54-202ENST00000314045 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
DDX54-202ENST00000314045 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
DDX54-202ENST00000314045 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
DDX54-202ENST00000314045 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
DDX54-202ENST00000314045 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
DDX54-202ENST00000314045 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
DDX54-202ENST00000314045 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
DDX54-202ENST00000314045 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
DDX54-202ENST00000314045 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
DDX54-202ENST00000314045 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
DDX54-202ENST00000314045 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
DDX54-202ENST00000314045 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
DDX54-202ENST00000314045 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
DDX54-202ENST00000314045 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
DDX54-202ENST00000314045 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
DDX54-202ENST00000314045 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
DDX54-202ENST00000314045 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 53 ms