RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
KDM2A-201ENST00000308783 SYNE2Q8WXH0 6885 aaKnown RBP3.67□□□□□ -1.82
KDM2A-201ENST00000308783 MT1EP04732 61 aa3.63□□□□□ -1.83
KDM2A-201ENST00000308783 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
KDM2A-201ENST00000308783 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
KDM2A-201ENST00000308783 MT1LQ93083 61 aa3.58□□□□□ -1.84
KDM2A-201ENST00000308783 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
KDM2A-201ENST00000308783 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
KDM2A-201ENST00000308783 LOC100996750A0A140TA64 210 aa3.52□□□□□ -1.85
KDM2A-201ENST00000308783 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
KDM2A-201ENST00000308783 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
KDM2A-201ENST00000308783 MDN1Q9NU22 5596 aa3.51□□□□□ -1.85
KDM2A-201ENST00000308783 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
KDM2A-201ENST00000308783 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
KDM2A-201ENST00000308783 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
KDM2A-201ENST00000308783 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
KDM2A-201ENST00000308783 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
KDM2A-201ENST00000308783 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
KDM2A-201ENST00000308783 MT1GP13640 62 aa3.41□□□□□ -1.86
KDM2A-201ENST00000308783 MT1MQ8N339 61 aa3.41□□□□□ -1.86
KDM2A-201ENST00000308783 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
KDM2A-201ENST00000308783 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
KDM2A-201ENST00000308783 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
KDM2A-201ENST00000308783 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
KDM2A-201ENST00000308783 KRTAP5-9P26371 169 aa3.34□□□□□ -1.88
KDM2A-201ENST00000308783 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
KDM2A-201ENST00000308783 PRM1P04553 51 aa3.29□□□□□ -1.88
KDM2A-201ENST00000308783 SPRR2EP22531 72 aa3.27□□□□□ -1.89
KDM2A-201ENST00000308783 SPRR2BP35325 72 aa3.27□□□□□ -1.89
KDM2A-201ENST00000308783 SPRR2AP35326 72 aa3.27□□□□□ -1.89
KDM2A-201ENST00000308783 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
KDM2A-201ENST00000308783 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
KDM2A-201ENST00000308783 KRTAP4-9Q9BYQ8 210 aa3.24□□□□□ -1.89
KDM2A-201ENST00000308783 LCE3BQ5TA77 95 aa3.21□□□□□ -1.9
KDM2A-201ENST00000308783 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
KDM2A-201ENST00000308783 SPRR2DP22532 72 aa3.13□□□□□ -1.91
KDM2A-201ENST00000308783 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
KDM2A-201ENST00000308783 NEBP20929 6669 aa3.08□□□□□ -1.92
KDM2A-201ENST00000308783 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
KDM2A-201ENST00000308783 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
KDM2A-201ENST00000308783 MT1AP04731 61 aa2.98□□□□□ -1.93
KDM2A-201ENST00000308783 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
KDM2A-201ENST00000308783 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
KDM2A-201ENST00000308783 KRTAP20-1Q3LI63 56 aa2.86□□□□□ -1.95
KDM2A-201ENST00000308783 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
KDM2A-201ENST00000308783 KRTAP9-4Q9BYQ2 154 aa2.84□□□□□ -1.95
KDM2A-201ENST00000308783 MT4P47944 62 aa2.81□□□□□ -1.96
KDM2A-201ENST00000308783 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
KDM2A-201ENST00000308783 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
KDM2A-201ENST00000308783 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
KDM2A-201ENST00000308783 MT3P25713 68 aa2.69□□□□□ -1.98
KDM2A-201ENST00000308783 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
KDM2A-201ENST00000308783 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
KDM2A-201ENST00000308783 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
KDM2A-201ENST00000308783 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
KDM2A-201ENST00000308783 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
KDM2A-201ENST00000308783 KRTAP4-11Q9BYQ6 195 aa2.48□□□□□ -2.01
KDM2A-201ENST00000308783 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
KDM2A-201ENST00000308783 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
KDM2A-201ENST00000308783 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
KDM2A-201ENST00000308783 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
KDM2A-201ENST00000308783 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
KDM2A-201ENST00000308783 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
KDM2A-201ENST00000308783 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
KDM2A-201ENST00000308783 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
KDM2A-201ENST00000308783 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
KDM2A-201ENST00000308783 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
KDM2A-201ENST00000308783 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
KDM2A-201ENST00000308783 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
KDM2A-201ENST00000308783 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
KDM2A-201ENST00000308783 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
KDM2A-201ENST00000308783 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
KDM2A-201ENST00000308783 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
KDM2A-201ENST00000308783 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
KDM2A-201ENST00000308783 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
KDM2A-201ENST00000308783 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
KDM2A-201ENST00000308783 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 118.9 ms