RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 MUC12Q9UKN1 5478 aa6.2□□□□□ -1.42
KRT28-201ENST00000306658 KRTAP6-3Q3LI67 103 aa6.17□□□□□ -1.42
KRT28-201ENST00000306658 LCE3CQ5T5A8 94 aa6.15□□□□□ -1.42
KRT28-201ENST00000306658 KRTAP19-3Q7Z4W3 81 aa6.15□□□□□ -1.42
KRT28-201ENST00000306658 MT1GP13640 62 aa6.11□□□□□ -1.43
KRT28-201ENST00000306658 SPRR5A0A1B0GTR4 108 aa6.08□□□□□ -1.44
KRT28-201ENST00000306658 LCE5AQ5TCM9 118 aa6.04□□□□□ -1.44
KRT28-201ENST00000306658 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
KRT28-201ENST00000306658 LCE1AQ5T7P2 110 aa6.02□□□□□ -1.45
KRT28-201ENST00000306658 MT1MQ8N339 61 aa6.01□□□□□ -1.45
KRT28-201ENST00000306658 KRTAP4-7Q9BYR0 210 aa6.01□□□□□ -1.45
KRT28-201ENST00000306658 SPRR2EP22531 72 aa6□□□□□ -1.45
KRT28-201ENST00000306658 SPRR2BP35325 72 aa6□□□□□ -1.45
KRT28-201ENST00000306658 SPRR2AP35326 72 aa6□□□□□ -1.45
KRT28-201ENST00000306658 KRTAP9-7A8MTY7 169 aa5.98□□□□□ -1.45
KRT28-201ENST00000306658 LUZP6Q538Z0 58 aa5.92□□□□□ -1.46
KRT28-201ENST00000306658 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
KRT28-201ENST00000306658 SPRR2DP22532 72 aa5.78□□□□□ -1.48
KRT28-201ENST00000306658 KRTAP9-6A8MVA2 160 aa5.77□□□□□ -1.49
KRT28-201ENST00000306658 NEBP20929 6669 aa5.76□□□□□ -1.49
KRT28-201ENST00000306658 DSTQ03001 7570 aaKnown RBP5.74□□□□□ -1.49
KRT28-201ENST00000306658 NDUFAF8A1L188 74 aa5.69□□□□□ -1.5
KRT28-201ENST00000306658 H3BS24 57 aa5.68□□□□□ -1.5
KRT28-201ENST00000306658 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
KRT28-201ENST00000306658 KRTAP9-9Q9BYP9 154 aa5.42□□□□□ -1.54
KRT28-201ENST00000306658 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
KRT28-201ENST00000306658 KRTAP2-3P0C7H8 128 aa5.41□□□□□ -1.54
KRT28-201ENST00000306658 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
KRT28-201ENST00000306658 KRTAP5-5Q701N2 237 aaPredicted RBP5.4□□□□□ -1.54
KRT28-201ENST00000306658 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
KRT28-201ENST00000306658 MT1AP04731 61 aa5.31□□□□□ -1.56
KRT28-201ENST00000306658 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
KRT28-201ENST00000306658 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
KRT28-201ENST00000306658 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
KRT28-201ENST00000306658 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
KRT28-201ENST00000306658 KRTAP5-4Q6L8H1 288 aa5.2□□□□□ -1.58
KRT28-201ENST00000306658 LCE1DQ5T752 114 aa5.15□□□□□ -1.59
KRT28-201ENST00000306658 LCE4AQ5TA78 99 aa5.14□□□□□ -1.59
KRT28-201ENST00000306658 KRTAP4-2Q9BYR5 136 aa5.13□□□□□ -1.59
KRT28-201ENST00000306658 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
KRT28-201ENST00000306658 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
KRT28-201ENST00000306658 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
KRT28-201ENST00000306658 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
KRT28-201ENST00000306658 A0A0A0MQY5 61 aa5.05□□□□□ -1.6
KRT28-201ENST00000306658 MT4P47944 62 aa5.01□□□□□ -1.61
KRT28-201ENST00000306658 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
KRT28-201ENST00000306658 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
KRT28-201ENST00000306658 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
KRT28-201ENST00000306658 MT3P25713 68 aa4.84□□□□□ -1.63
KRT28-201ENST00000306658 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
KRT28-201ENST00000306658 INE1O15225 51 aa4.72□□□□□ -1.65
KRT28-201ENST00000306658 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
KRT28-201ENST00000306658 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
KRT28-201ENST00000306658 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
KRT28-201ENST00000306658 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
KRT28-201ENST00000306658 AHNAK2Q8IVF2 5795 aa4.33□□□□□ -1.72
KRT28-201ENST00000306658 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
KRT28-201ENST00000306658 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
KRT28-201ENST00000306658 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
KRT28-201ENST00000306658 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
KRT28-201ENST00000306658 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
KRT28-201ENST00000306658 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
KRT28-201ENST00000306658 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
KRT28-201ENST00000306658 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
KRT28-201ENST00000306658 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
KRT28-201ENST00000306658 PRM1P04553 51 aa3.87□□□□□ -1.79
KRT28-201ENST00000306658 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
KRT28-201ENST00000306658 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
KRT28-201ENST00000306658 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
KRT28-201ENST00000306658 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
KRT28-201ENST00000306658 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
KRT28-201ENST00000306658 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
KRT28-201ENST00000306658 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
KRT28-201ENST00000306658 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
KRT28-201ENST00000306658 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
KRT28-201ENST00000306658 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
KRT28-201ENST00000306658 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 97.7 ms