RNA–Protein interactions for RNA: ENST00000305510.3

CNNM3-201, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNNM3, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-201ENST00000305510 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
CNNM3-201ENST00000305510 KRTAP19-7Q3SYF9 63 aa6.24□□□□□ -1.41
CNNM3-201ENST00000305510 KRTAP4-3Q9BYR4 195 aa6.14□□□□□ -1.43
CNNM3-201ENST00000305510 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
CNNM3-201ENST00000305510 MT1LQ93083 61 aa6.09□□□□□ -1.44
CNNM3-201ENST00000305510 MT1EP04732 61 aa6.06□□□□□ -1.44
CNNM3-201ENST00000305510 MT1GP13640 62 aa6.03□□□□□ -1.44
CNNM3-201ENST00000305510 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
CNNM3-201ENST00000305510 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
CNNM3-201ENST00000305510 SPRR2FQ96RM1 72 aa5.87□□□□□ -1.47
CNNM3-201ENST00000305510 MACF1Q9UPN3 7388 aaKnown RBP5.84□□□□□ -1.47
CNNM3-201ENST00000305510 KRTAP19-6Q3LI70 58 aa5.78□□□□□ -1.48
CNNM3-201ENST00000305510 LCE2DQ5TA82 110 aaPredicted RBP5.77□□□□□ -1.49
CNNM3-201ENST00000305510 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
CNNM3-201ENST00000305510 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
CNNM3-201ENST00000305510 MT1MQ8N339 61 aa5.71□□□□□ -1.5
CNNM3-201ENST00000305510 KRTAP19-3Q7Z4W3 81 aa5.7□□□□□ -1.5
CNNM3-201ENST00000305510 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
CNNM3-201ENST00000305510 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
CNNM3-201ENST00000305510 PRM1P04553 51 aa5.38□□□□□ -1.55
CNNM3-201ENST00000305510 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
CNNM3-201ENST00000305510 LCE5AQ5TCM9 118 aa5.37□□□□□ -1.55
CNNM3-201ENST00000305510 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
CNNM3-201ENST00000305510 KRTAP6-1Q3LI64 71 aa5.29□□□□□ -1.56
CNNM3-201ENST00000305510 SPRR2EP22531 72 aa5.26□□□□□ -1.57
CNNM3-201ENST00000305510 SPRR2BP35325 72 aa5.26□□□□□ -1.57
CNNM3-201ENST00000305510 SPRR2AP35326 72 aa5.26□□□□□ -1.57
CNNM3-201ENST00000305510 LCE3DQ9BYE3 92 aa5.22□□□□□ -1.57
CNNM3-201ENST00000305510 LCE3EQ5T5B0 92 aa5.19□□□□□ -1.58
CNNM3-201ENST00000305510 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.58
CNNM3-201ENST00000305510 KRTAP6-3Q3LI67 103 aa5.13□□□□□ -1.59
CNNM3-201ENST00000305510 LCE1AQ5T7P2 110 aa5.11□□□□□ -1.59
CNNM3-201ENST00000305510 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
CNNM3-201ENST00000305510 MT1AP04731 61 aa5.06□□□□□ -1.6
CNNM3-201ENST00000305510 SPRR2DP22532 72 aa4.99□□□□□ -1.61
CNNM3-201ENST00000305510 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
CNNM3-201ENST00000305510 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
CNNM3-201ENST00000305510 KRTAP5-9P26371 169 aa4.76□□□□□ -1.65
CNNM3-201ENST00000305510 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
CNNM3-201ENST00000305510 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
CNNM3-201ENST00000305510 MT4P47944 62 aa4.67□□□□□ -1.66
CNNM3-201ENST00000305510 MT3P25713 68 aa4.65□□□□□ -1.67
CNNM3-201ENST00000305510 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.61□□□□□ -1.67
CNNM3-201ENST00000305510 MUC19Q7Z5P9 8384 aa4.59□□□□□ -1.68
CNNM3-201ENST00000305510 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
CNNM3-201ENST00000305510 KRTAP4-6Q9BYQ5 205 aa4.47□□□□□ -1.69
CNNM3-201ENST00000305510 NEBP20929 6669 aa4.4□□□□□ -1.71
CNNM3-201ENST00000305510 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
CNNM3-201ENST00000305510 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
CNNM3-201ENST00000305510 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
CNNM3-201ENST00000305510 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
CNNM3-201ENST00000305510 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
CNNM3-201ENST00000305510 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
CNNM3-201ENST00000305510 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
CNNM3-201ENST00000305510 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
CNNM3-201ENST00000305510 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
CNNM3-201ENST00000305510 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
CNNM3-201ENST00000305510 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
CNNM3-201ENST00000305510 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
CNNM3-201ENST00000305510 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
CNNM3-201ENST00000305510 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
CNNM3-201ENST00000305510 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
CNNM3-201ENST00000305510 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
CNNM3-201ENST00000305510 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
CNNM3-201ENST00000305510 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
CNNM3-201ENST00000305510 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
CNNM3-201ENST00000305510 KRTAP21-1Q3LI58 79 aa3.27□□□□□ -1.89
CNNM3-201ENST00000305510 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
CNNM3-201ENST00000305510 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
CNNM3-201ENST00000305510 KRTAP5-8O75690 187 aa3.15□□□□□ -1.9
CNNM3-201ENST00000305510 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
CNNM3-201ENST00000305510 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
CNNM3-201ENST00000305510 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
CNNM3-201ENST00000305510 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
CNNM3-201ENST00000305510 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
CNNM3-201ENST00000305510 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
CNNM3-201ENST00000305510 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 13.8 ms