RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 MT1GP13640 62 aa4.82□□□□□ -1.64
COL6A2-201ENST00000300527 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
COL6A2-201ENST00000300527 FCGBPQ9Y6R7 5405 aaPredicted RBP4.78□□□□□ -1.64
COL6A2-201ENST00000300527 MUC12Q9UKN1 5478 aa4.76□□□□□ -1.65
COL6A2-201ENST00000300527 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.65
COL6A2-201ENST00000300527 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
COL6A2-201ENST00000300527 LCE2AQ5TA79 106 aaPredicted RBP4.65□□□□□ -1.67
COL6A2-201ENST00000300527 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
COL6A2-201ENST00000300527 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
COL6A2-201ENST00000300527 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
COL6A2-201ENST00000300527 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
COL6A2-201ENST00000300527 MT1MQ8N339 61 aa4.54□□□□□ -1.68
COL6A2-201ENST00000300527 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
COL6A2-201ENST00000300527 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
COL6A2-201ENST00000300527 SYNE2Q8WXH0 6885 aaKnown RBP4.39□□□□□ -1.71
COL6A2-201ENST00000300527 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
COL6A2-201ENST00000300527 KRTAP19-6Q3LI70 58 aa4.36□□□□□ -1.71
COL6A2-201ENST00000300527 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
COL6A2-201ENST00000300527 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
COL6A2-201ENST00000300527 PRM1P04553 51 aa4.29□□□□□ -1.72
COL6A2-201ENST00000300527 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
COL6A2-201ENST00000300527 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
COL6A2-201ENST00000300527 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
COL6A2-201ENST00000300527 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
COL6A2-201ENST00000300527 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.74
COL6A2-201ENST00000300527 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
COL6A2-201ENST00000300527 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
COL6A2-201ENST00000300527 MT1AP04731 61 aa4.11□□□□□ -1.75
COL6A2-201ENST00000300527 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
COL6A2-201ENST00000300527 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
COL6A2-201ENST00000300527 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
COL6A2-201ENST00000300527 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
COL6A2-201ENST00000300527 KRTAP6-3Q3LI67 103 aa3.96□□□□□ -1.78
COL6A2-201ENST00000300527 SPRR2EP22531 72 aa3.84□□□□□ -1.79
COL6A2-201ENST00000300527 SPRR2BP35325 72 aa3.84□□□□□ -1.79
COL6A2-201ENST00000300527 SPRR2AP35326 72 aa3.84□□□□□ -1.79
COL6A2-201ENST00000300527 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
COL6A2-201ENST00000300527 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
COL6A2-201ENST00000300527 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
COL6A2-201ENST00000300527 MT3P25713 68 aa3.69□□□□□ -1.82
COL6A2-201ENST00000300527 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
COL6A2-201ENST00000300527 SPRR2DP22532 72 aa3.64□□□□□ -1.83
COL6A2-201ENST00000300527 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
COL6A2-201ENST00000300527 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
COL6A2-201ENST00000300527 MT4P47944 62 aa3.39□□□□□ -1.87
COL6A2-201ENST00000300527 KRTAP4-6Q9BYQ5 205 aa3.32□□□□□ -1.88
COL6A2-201ENST00000300527 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
COL6A2-201ENST00000300527 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
COL6A2-201ENST00000300527 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
COL6A2-201ENST00000300527 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
COL6A2-201ENST00000300527 NEBP20929 6669 aa3.15□□□□□ -1.91
COL6A2-201ENST00000300527 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
COL6A2-201ENST00000300527 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
COL6A2-201ENST00000300527 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
COL6A2-201ENST00000300527 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
COL6A2-201ENST00000300527 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
COL6A2-201ENST00000300527 KRTAP20-1Q3LI63 56 aa2.88□□□□□ -1.95
COL6A2-201ENST00000300527 LCE4AQ5TA78 99 aa2.88□□□□□ -1.95
COL6A2-201ENST00000300527 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
COL6A2-201ENST00000300527 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
COL6A2-201ENST00000300527 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
COL6A2-201ENST00000300527 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
COL6A2-201ENST00000300527 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
COL6A2-201ENST00000300527 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
COL6A2-201ENST00000300527 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
COL6A2-201ENST00000300527 GPR98Q8WXG9 6306 aa2.53□□□□□ -2.01
COL6A2-201ENST00000300527 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
COL6A2-201ENST00000300527 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
COL6A2-201ENST00000300527 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
COL6A2-201ENST00000300527 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
COL6A2-201ENST00000300527 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
COL6A2-201ENST00000300527 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
COL6A2-201ENST00000300527 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
COL6A2-201ENST00000300527 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
COL6A2-201ENST00000300527 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
COL6A2-201ENST00000300527 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
COL6A2-201ENST00000300527 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 94 ms