RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
CDH8-201ENST00000299345 KRTAP2-3P0C7H8 128 aa4.49□□□□□ -1.69
CDH8-201ENST00000299345 KRTAP2-4Q9BYR9 128 aa4.49□□□□□ -1.69
CDH8-201ENST00000299345 KRTAP2-1Q9BYU5 128 aa4.49□□□□□ -1.69
CDH8-201ENST00000299345 MT1GP13640 62 aa4.48□□□□□ -1.69
CDH8-201ENST00000299345 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
CDH8-201ENST00000299345 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
CDH8-201ENST00000299345 LCE2DQ5TA82 110 aaPredicted RBP4.47□□□□□ -1.69
CDH8-201ENST00000299345 SPRR2FQ96RM1 72 aa4.46□□□□□ -1.69
CDH8-201ENST00000299345 FCGBPQ9Y6R7 5405 aaPredicted RBP4.46□□□□□ -1.7
CDH8-201ENST00000299345 MT1MQ8N339 61 aa4.45□□□□□ -1.7
CDH8-201ENST00000299345 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
CDH8-201ENST00000299345 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
CDH8-201ENST00000299345 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.73
CDH8-201ENST00000299345 MACF1Q9UPN3 7388 aaKnown RBP4.26□□□□□ -1.73
CDH8-201ENST00000299345 KRTAP9-2Q9BYQ4 174 aa4.18□□□□□ -1.74
CDH8-201ENST00000299345 LCE3BQ5TA77 95 aa4.15□□□□□ -1.75
CDH8-201ENST00000299345 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
CDH8-201ENST00000299345 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
CDH8-201ENST00000299345 SPRR2EP22531 72 aa4.08□□□□□ -1.76
CDH8-201ENST00000299345 SPRR2BP35325 72 aa4.08□□□□□ -1.76
CDH8-201ENST00000299345 SPRR2AP35326 72 aa4.08□□□□□ -1.76
CDH8-201ENST00000299345 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
CDH8-201ENST00000299345 MDN1Q9NU22 5596 aa4.04□□□□□ -1.76
CDH8-201ENST00000299345 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
CDH8-201ENST00000299345 MT1AP04731 61 aa3.99□□□□□ -1.77
CDH8-201ENST00000299345 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
CDH8-201ENST00000299345 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
CDH8-201ENST00000299345 SPRR2DP22532 72 aa3.91□□□□□ -1.78
CDH8-201ENST00000299345 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
CDH8-201ENST00000299345 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
CDH8-201ENST00000299345 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
CDH8-201ENST00000299345 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
CDH8-201ENST00000299345 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
CDH8-201ENST00000299345 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.75□□□□□ -1.81
CDH8-201ENST00000299345 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
CDH8-201ENST00000299345 MT3P25713 68 aa3.66□□□□□ -1.82
CDH8-201ENST00000299345 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
CDH8-201ENST00000299345 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
CDH8-201ENST00000299345 PRM1P04553 51 aa3.6□□□□□ -1.83
CDH8-201ENST00000299345 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.83
CDH8-201ENST00000299345 MT4P47944 62 aa3.46□□□□□ -1.86
CDH8-201ENST00000299345 NEBP20929 6669 aa3.46□□□□□ -1.86
CDH8-201ENST00000299345 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
CDH8-201ENST00000299345 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
CDH8-201ENST00000299345 LCE4AQ5TA78 99 aa3.34□□□□□ -1.88
CDH8-201ENST00000299345 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
CDH8-201ENST00000299345 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
CDH8-201ENST00000299345 LCE1DQ5T752 114 aa3.19□□□□□ -1.9
CDH8-201ENST00000299345 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
CDH8-201ENST00000299345 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
CDH8-201ENST00000299345 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
CDH8-201ENST00000299345 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
CDH8-201ENST00000299345 KRTAP5-3Q6L8H2 238 aa3.05□□□□□ -1.92
CDH8-201ENST00000299345 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
CDH8-201ENST00000299345 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
CDH8-201ENST00000299345 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
CDH8-201ENST00000299345 KRTAP4-11Q9BYQ6 195 aa2.76□□□□□ -1.97
CDH8-201ENST00000299345 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
CDH8-201ENST00000299345 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
CDH8-201ENST00000299345 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
CDH8-201ENST00000299345 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
CDH8-201ENST00000299345 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
CDH8-201ENST00000299345 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
CDH8-201ENST00000299345 KRTAP5-8O75690 187 aa2.57□□□□□ -2
CDH8-201ENST00000299345 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
CDH8-201ENST00000299345 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
CDH8-201ENST00000299345 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
CDH8-201ENST00000299345 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
CDH8-201ENST00000299345 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
CDH8-201ENST00000299345 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
CDH8-201ENST00000299345 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
CDH8-201ENST00000299345 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
CDH8-201ENST00000299345 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
CDH8-201ENST00000299345 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
CDH8-201ENST00000299345 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
CDH8-201ENST00000299345 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 53.2 ms