RNA–Protein interactions for RNA: ENST00000298694.8

ARHGEF40-201, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGEF40, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-201ENST00000298694 TNXBP22105 4242 aa4.98□□□□□ -1.61
ARHGEF40-201ENST00000298694 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
ARHGEF40-201ENST00000298694 KMT2CQ8NEZ4 4911 aaKnown RBP4.98□□□□□ -1.61
ARHGEF40-201ENST00000298694 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
ARHGEF40-201ENST00000298694 MUC17Q685J3 4493 aa4.92□□□□□ -1.62
ARHGEF40-201ENST00000298694 EPPK1P58107 5090 aaKnown RBP4.88□□□□□ -1.63
ARHGEF40-201ENST00000298694 MT1AP04731 61 aa4.78□□□□□ -1.64
ARHGEF40-201ENST00000298694 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
ARHGEF40-201ENST00000298694 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
ARHGEF40-201ENST00000298694 KRTAP9-6A0A140TA67 174 aa4.72□□□□□ -1.65
ARHGEF40-201ENST00000298694 ABCA13Q86UQ4 5058 aa4.72□□□□□ -1.65
ARHGEF40-201ENST00000298694 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
ARHGEF40-201ENST00000298694 KRTAP2-3P0C7H8 128 aa4.69□□□□□ -1.66
ARHGEF40-201ENST00000298694 KRTAP2-4Q9BYR9 128 aa4.69□□□□□ -1.66
ARHGEF40-201ENST00000298694 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
ARHGEF40-201ENST00000298694 LCE2AQ5TA79 106 aaPredicted RBP4.67□□□□□ -1.66
ARHGEF40-201ENST00000298694 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
ARHGEF40-201ENST00000298694 FAT4Q6V0I7 4981 aa4.56□□□□□ -1.68
ARHGEF40-201ENST00000298694 RNF213Q63HN8 5207 aa4.55□□□□□ -1.68
ARHGEF40-201ENST00000298694 HMCN2Q8NDA2 5059 aa4.52□□□□□ -1.69
ARHGEF40-201ENST00000298694 SYNE2Q8WXH0 6885 aaKnown RBP4.5□□□□□ -1.69
ARHGEF40-201ENST00000298694 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
ARHGEF40-201ENST00000298694 FSIP2Q5CZC0 6907 aa4.49□□□□□ -1.69
ARHGEF40-201ENST00000298694 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
ARHGEF40-201ENST00000298694 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
ARHGEF40-201ENST00000298694 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
ARHGEF40-201ENST00000298694 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
ARHGEF40-201ENST00000298694 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
ARHGEF40-201ENST00000298694 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
ARHGEF40-201ENST00000298694 UBR4Q5T4S7 5183 aa4.42□□□□□ -1.7
ARHGEF40-201ENST00000298694 MUC2Q02817 5179 aa4.38□□□□□ -1.71
ARHGEF40-201ENST00000298694 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
ARHGEF40-201ENST00000298694 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
ARHGEF40-201ENST00000298694 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
ARHGEF40-201ENST00000298694 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
ARHGEF40-201ENST00000298694 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
ARHGEF40-201ENST00000298694 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.29□□□□□ -1.72
ARHGEF40-201ENST00000298694 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
ARHGEF40-201ENST00000298694 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
ARHGEF40-201ENST00000298694 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
ARHGEF40-201ENST00000298694 USH2AO75445 5202 aa3.84□□□□□ -1.79
ARHGEF40-201ENST00000298694 FCGBPQ9Y6R7 5405 aaPredicted RBP3.76□□□□□ -1.81
ARHGEF40-201ENST00000298694 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
ARHGEF40-201ENST00000298694 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
ARHGEF40-201ENST00000298694 KMT2DO14686 5537 aa3.67□□□□□ -1.82
ARHGEF40-201ENST00000298694 DSTQ03001 7570 aaKnown RBP3.65□□□□□ -1.83
ARHGEF40-201ENST00000298694 NEBP20929 6669 aa3.65□□□□□ -1.83
ARHGEF40-201ENST00000298694 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
ARHGEF40-201ENST00000298694 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
ARHGEF40-201ENST00000298694 MACF1Q9UPN3 7388 aaKnown RBP3.57□□□□□ -1.84
ARHGEF40-201ENST00000298694 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
ARHGEF40-201ENST00000298694 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
ARHGEF40-201ENST00000298694 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
ARHGEF40-201ENST00000298694 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
ARHGEF40-201ENST00000298694 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
ARHGEF40-201ENST00000298694 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
ARHGEF40-201ENST00000298694 MUC12Q9UKN1 5478 aa3.26□□□□□ -1.89
ARHGEF40-201ENST00000298694 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
ARHGEF40-201ENST00000298694 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
ARHGEF40-201ENST00000298694 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
ARHGEF40-201ENST00000298694 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
ARHGEF40-201ENST00000298694 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
ARHGEF40-201ENST00000298694 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
ARHGEF40-201ENST00000298694 HMCN1Q96RW7 5635 aa2.59□□□□□ -1.99
ARHGEF40-201ENST00000298694 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
ARHGEF40-201ENST00000298694 PHGR1C9JFL3 82 aa2.56□□□□□ -2
ARHGEF40-201ENST00000298694 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
ARHGEF40-201ENST00000298694 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
ARHGEF40-201ENST00000298694 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
ARHGEF40-201ENST00000298694 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
ARHGEF40-201ENST00000298694 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
ARHGEF40-201ENST00000298694 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
ARHGEF40-201ENST00000298694 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
ARHGEF40-201ENST00000298694 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
ARHGEF40-201ENST00000298694 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
ARHGEF40-201ENST00000298694 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.1
ARHGEF40-201ENST00000298694 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms