RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 RPS28P62857 69 aaKnown RBP2.4□□□□□ -2.03
SSX3-201ENST00000298396 SMIM26A0A096LP01 95 aa2.38□□□□□ -2.03
SSX3-201ENST00000298396 PSPHP1O15172 72 aa2.38□□□□□ -2.03
SSX3-201ENST00000298396 NEBP20929 6669 aa2.38□□□□□ -2.03
SSX3-201ENST00000298396 PRO2289Q9P1D8 64 aa2.38□□□□□ -2.03
SSX3-201ENST00000298396 MUC12Q9UKN1 5478 aa2.38□□□□□ -2.03
SSX3-201ENST00000298396 SPINT4Q6UDR6 99 aa2.36□□□□□ -2.03
SSX3-201ENST00000298396 UQCR11O14957 56 aa2.35□□□□□ -2.03
SSX3-201ENST00000298396 V9GYY9 64 aa2.35□□□□□ -2.03
SSX3-201ENST00000298396 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.03
SSX3-201ENST00000298396 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.04
SSX3-201ENST00000298396 CAMK2N1Q7Z7J9 78 aa2.33□□□□□ -2.04
SSX3-201ENST00000298396 MIR22HGQ0VDD5 57 aa2.32□□□□□ -2.04
SSX3-201ENST00000298396 MDN1Q9NU22 5596 aa2.32□□□□□ -2.04
SSX3-201ENST00000298396 C10orf95Q9H7T3 257 aa2.31□□□□□ -2.04
SSX3-201ENST00000298396 A6NED7 52 aa2.28□□□□□ -2.04
SSX3-201ENST00000298396 KRTAP8-1Q8IUC2 63 aa2.27□□□□□ -2.05
SSX3-201ENST00000298396 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
SSX3-201ENST00000298396 SPRR2FQ96RM1 72 aa2.25□□□□□ -2.05
SSX3-201ENST00000298396 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
SSX3-201ENST00000298396 CDC42SE1Q9NRR8 79 aa2.23□□□□□ -2.05
SSX3-201ENST00000298396 KRTAP20-1Q3LI63 56 aa2.21□□□□□ -2.06
SSX3-201ENST00000298396 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
SSX3-201ENST00000298396 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
SSX3-201ENST00000298396 MT1EP04732 61 aa2.19□□□□□ -2.06
SSX3-201ENST00000298396 TNP1P09430 55 aa2.19□□□□□ -2.06
SSX3-201ENST00000298396 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
SSX3-201ENST00000298396 K7ERS5 55 aa2.18□□□□□ -2.06
SSX3-201ENST00000298396 SPRR2EP22531 72 aa2.18□□□□□ -2.06
SSX3-201ENST00000298396 SPRR2BP35325 72 aa2.18□□□□□ -2.06
SSX3-201ENST00000298396 SPRR2AP35326 72 aa2.18□□□□□ -2.06
SSX3-201ENST00000298396 KRTAP25-1Q3LHN0 102 aa2.16□□□□□ -2.06
SSX3-201ENST00000298396 ROMO1P60602 79 aa2.13□□□□□ -2.07
SSX3-201ENST00000298396 KRTAP19-3Q7Z4W3 81 aa2.12□□□□□ -2.07
SSX3-201ENST00000298396 MT1LQ93083 61 aa2.12□□□□□ -2.07
SSX3-201ENST00000298396 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
SSX3-201ENST00000298396 BRK1Q8WUW1 75 aa2.11□□□□□ -2.07
SSX3-201ENST00000298396 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
SSX3-201ENST00000298396 SPRR2DP22532 72 aa2.1□□□□□ -2.07
SSX3-201ENST00000298396 KRTAP12-3P60328 96 aa2.1□□□□□ -2.07
SSX3-201ENST00000298396 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
SSX3-201ENST00000298396 MT1MQ8N339 61 aa2.07□□□□□ -2.08
SSX3-201ENST00000298396 MT1GP13640 62 aa2.06□□□□□ -2.08
SSX3-201ENST00000298396 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
SSX3-201ENST00000298396 DSTQ03001 7570 aaKnown RBP2.03□□□□□ -2.08
SSX3-201ENST00000298396 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
SSX3-201ENST00000298396 PP632Q6XCG6 107 aa2.01□□□□□ -2.09
SSX3-201ENST00000298396 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
SSX3-201ENST00000298396 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
SSX3-201ENST00000298396 PMAIP1Q13794 54 aa1.98□□□□□ -2.09
SSX3-201ENST00000298396 PRO0628Q9UI54 55 aa1.97□□□□□ -2.09
SSX3-201ENST00000298396 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
SSX3-201ENST00000298396 LUZP6Q538Z0 58 aa1.91□□□□□ -2.1
SSX3-201ENST00000298396 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
SSX3-201ENST00000298396 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
SSX3-201ENST00000298396 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
SSX3-201ENST00000298396 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
SSX3-201ENST00000298396 KTN1-AS1Q86SY8 53 aa1.85□□□□□ -2.11
SSX3-201ENST00000298396 MT4P47944 62 aa1.84□□□□□ -2.11
SSX3-201ENST00000298396 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
SSX3-201ENST00000298396 MT1AP04731 61 aa1.79□□□□□ -2.12
SSX3-201ENST00000298396 SYNE1Q8NF91 8797 aaKnown RBP1.78□□□□□ -2.12
SSX3-201ENST00000298396 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
SSX3-201ENST00000298396 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
SSX3-201ENST00000298396 KRTAP12-4P60329 112 aa1.74□□□□□ -2.13
SSX3-201ENST00000298396 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
SSX3-201ENST00000298396 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
SSX3-201ENST00000298396 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
SSX3-201ENST00000298396 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
SSX3-201ENST00000298396 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
SSX3-201ENST00000298396 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
SSX3-201ENST00000298396 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
SSX3-201ENST00000298396 INE1O15225 51 aa1.11□□□□□ -2.23
SSX3-201ENST00000298396 PRM1P04553 51 aa1.11□□□□□ -2.23
SSX3-201ENST00000298396 PHGR1C9JFL3 82 aa1.05□□□□□ -2.24
SSX3-201ENST00000298396 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
SSX3-201ENST00000298396 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 95.9 ms