RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
CNTNAP3-201ENST00000297668 PRM1P04553 51 aa5.1□□□□□ -1.59
CNTNAP3-201ENST00000297668 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
CNTNAP3-201ENST00000297668 TNXBP22105 4242 aa5.06□□□□□ -1.6
CNTNAP3-201ENST00000297668 UBR4Q5T4S7 5183 aa5.05□□□□□ -1.6
CNTNAP3-201ENST00000297668 MT4P47944 62 aa5.01□□□□□ -1.61
CNTNAP3-201ENST00000297668 KRTAP19-7Q3SYF9 63 aa4.99□□□□□ -1.61
CNTNAP3-201ENST00000297668 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
CNTNAP3-201ENST00000297668 RNF213Q63HN8 5207 aa4.94□□□□□ -1.62
CNTNAP3-201ENST00000297668 MUC2Q02817 5179 aa4.93□□□□□ -1.62
CNTNAP3-201ENST00000297668 LCE1BQ5T7P3 118 aa4.91□□□□□ -1.62
CNTNAP3-201ENST00000297668 FAT4Q6V0I7 4981 aa4.9□□□□□ -1.62
CNTNAP3-201ENST00000297668 MT1AP04731 61 aa4.89□□□□□ -1.63
CNTNAP3-201ENST00000297668 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
CNTNAP3-201ENST00000297668 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
CNTNAP3-201ENST00000297668 HMCN2Q8NDA2 5059 aa4.86□□□□□ -1.63
CNTNAP3-201ENST00000297668 LCE2AQ5TA79 106 aaPredicted RBP4.85□□□□□ -1.63
CNTNAP3-201ENST00000297668 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
CNTNAP3-201ENST00000297668 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
CNTNAP3-201ENST00000297668 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
CNTNAP3-201ENST00000297668 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
CNTNAP3-201ENST00000297668 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
CNTNAP3-201ENST00000297668 KRTAP9-6A8MVA2 160 aa4.62□□□□□ -1.67
CNTNAP3-201ENST00000297668 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
CNTNAP3-201ENST00000297668 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
CNTNAP3-201ENST00000297668 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
CNTNAP3-201ENST00000297668 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
CNTNAP3-201ENST00000297668 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
CNTNAP3-201ENST00000297668 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
CNTNAP3-201ENST00000297668 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.69
CNTNAP3-201ENST00000297668 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
CNTNAP3-201ENST00000297668 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
CNTNAP3-201ENST00000297668 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
CNTNAP3-201ENST00000297668 USH2AO75445 5202 aa4.37□□□□□ -1.71
CNTNAP3-201ENST00000297668 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
CNTNAP3-201ENST00000297668 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
CNTNAP3-201ENST00000297668 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
CNTNAP3-201ENST00000297668 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
CNTNAP3-201ENST00000297668 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
CNTNAP3-201ENST00000297668 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
CNTNAP3-201ENST00000297668 LCE1CQ5T751 118 aa4.13□□□□□ -1.75
CNTNAP3-201ENST00000297668 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
CNTNAP3-201ENST00000297668 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
CNTNAP3-201ENST00000297668 KMT2DO14686 5537 aa4.13□□□□□ -1.75
CNTNAP3-201ENST00000297668 MUC19Q7Z5P9 8384 aa4.02□□□□□ -1.77
CNTNAP3-201ENST00000297668 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
CNTNAP3-201ENST00000297668 SSPOA2VEC9 5147 aa3.79□□□□□ -1.8
CNTNAP3-201ENST00000297668 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
CNTNAP3-201ENST00000297668 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
CNTNAP3-201ENST00000297668 NEBP20929 6669 aa3.77□□□□□ -1.81
CNTNAP3-201ENST00000297668 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
CNTNAP3-201ENST00000297668 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
CNTNAP3-201ENST00000297668 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
CNTNAP3-201ENST00000297668 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
CNTNAP3-201ENST00000297668 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
CNTNAP3-201ENST00000297668 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
CNTNAP3-201ENST00000297668 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
CNTNAP3-201ENST00000297668 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.88
CNTNAP3-201ENST00000297668 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.88
CNTNAP3-201ENST00000297668 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
CNTNAP3-201ENST00000297668 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
CNTNAP3-201ENST00000297668 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
CNTNAP3-201ENST00000297668 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
CNTNAP3-201ENST00000297668 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
CNTNAP3-201ENST00000297668 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
CNTNAP3-201ENST00000297668 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
CNTNAP3-201ENST00000297668 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
CNTNAP3-201ENST00000297668 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
CNTNAP3-201ENST00000297668 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
CNTNAP3-201ENST00000297668 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
CNTNAP3-201ENST00000297668 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
CNTNAP3-201ENST00000297668 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
CNTNAP3-201ENST00000297668 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
CNTNAP3-201ENST00000297668 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
CNTNAP3-201ENST00000297668 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
CNTNAP3-201ENST00000297668 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
CNTNAP3-201ENST00000297668 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 75.7 ms