RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 KRTAP2-4Q9BYR9 128 aa5.55□□□□□ -1.52
SBSPON-201ENST00000297354 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
SBSPON-201ENST00000297354 KRTAP19-7Q3SYF9 63 aa5.48□□□□□ -1.53
SBSPON-201ENST00000297354 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
SBSPON-201ENST00000297354 MT1LQ93083 61 aa5.46□□□□□ -1.54
SBSPON-201ENST00000297354 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
SBSPON-201ENST00000297354 MUC12Q9UKN1 5478 aa5.37□□□□□ -1.55
SBSPON-201ENST00000297354 MT1EP04732 61 aa5.36□□□□□ -1.55
SBSPON-201ENST00000297354 SYNE2Q8WXH0 6885 aaKnown RBP5.28□□□□□ -1.56
SBSPON-201ENST00000297354 LCE2AQ5TA79 106 aaPredicted RBP5.28□□□□□ -1.56
SBSPON-201ENST00000297354 SSPOA2VEC9 5147 aa5.17□□□□□ -1.58
SBSPON-201ENST00000297354 SPRR2FQ96RM1 72 aa5.12□□□□□ -1.59
SBSPON-201ENST00000297354 PRM1P04553 51 aa5.12□□□□□ -1.59
SBSPON-201ENST00000297354 LCE3DQ9BYE3 92 aa5.07□□□□□ -1.6
SBSPON-201ENST00000297354 MT1MQ8N339 61 aa5.05□□□□□ -1.6
SBSPON-201ENST00000297354 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
SBSPON-201ENST00000297354 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
SBSPON-201ENST00000297354 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
SBSPON-201ENST00000297354 LCE3EQ5T5B0 92 aa4.99□□□□□ -1.61
SBSPON-201ENST00000297354 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
SBSPON-201ENST00000297354 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
SBSPON-201ENST00000297354 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
SBSPON-201ENST00000297354 KRTAP19-6Q3LI70 58 aa4.84□□□□□ -1.63
SBSPON-201ENST00000297354 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
SBSPON-201ENST00000297354 MDN1Q9NU22 5596 aa4.68□□□□□ -1.66
SBSPON-201ENST00000297354 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
SBSPON-201ENST00000297354 SPRR2EP22531 72 aa4.55□□□□□ -1.68
SBSPON-201ENST00000297354 SPRR2BP35325 72 aa4.55□□□□□ -1.68
SBSPON-201ENST00000297354 SPRR2AP35326 72 aa4.55□□□□□ -1.68
SBSPON-201ENST00000297354 KRTAP5-5Q701N2 237 aaPredicted RBP4.53□□□□□ -1.68
SBSPON-201ENST00000297354 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
SBSPON-201ENST00000297354 MT1AP04731 61 aa4.52□□□□□ -1.69
SBSPON-201ENST00000297354 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
SBSPON-201ENST00000297354 KRTAP9-6A0A140TA67 174 aa4.43□□□□□ -1.7
SBSPON-201ENST00000297354 MUC19Q7Z5P9 8384 aa4.42□□□□□ -1.7
SBSPON-201ENST00000297354 KRTAP6-3Q3LI67 103 aa4.37□□□□□ -1.71
SBSPON-201ENST00000297354 SPRR2DP22532 72 aa4.33□□□□□ -1.72
SBSPON-201ENST00000297354 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
SBSPON-201ENST00000297354 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
SBSPON-201ENST00000297354 MT3P25713 68 aa4.25□□□□□ -1.73
SBSPON-201ENST00000297354 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
SBSPON-201ENST00000297354 MT4P47944 62 aa4.07□□□□□ -1.76
SBSPON-201ENST00000297354 KRTAP5-9P26371 169 aa4□□□□□ -1.77
SBSPON-201ENST00000297354 LCE1DQ5T752 114 aa3.99□□□□□ -1.77
SBSPON-201ENST00000297354 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
SBSPON-201ENST00000297354 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
SBSPON-201ENST00000297354 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
SBSPON-201ENST00000297354 NEBP20929 6669 aa3.75□□□□□ -1.81
SBSPON-201ENST00000297354 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
SBSPON-201ENST00000297354 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
SBSPON-201ENST00000297354 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
SBSPON-201ENST00000297354 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
SBSPON-201ENST00000297354 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.86
SBSPON-201ENST00000297354 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
SBSPON-201ENST00000297354 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
SBSPON-201ENST00000297354 LCE4AQ5TA78 99 aa3.34□□□□□ -1.88
SBSPON-201ENST00000297354 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
SBSPON-201ENST00000297354 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
SBSPON-201ENST00000297354 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
SBSPON-201ENST00000297354 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
SBSPON-201ENST00000297354 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
SBSPON-201ENST00000297354 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
SBSPON-201ENST00000297354 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
SBSPON-201ENST00000297354 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
SBSPON-201ENST00000297354 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
SBSPON-201ENST00000297354 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
SBSPON-201ENST00000297354 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
SBSPON-201ENST00000297354 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
SBSPON-201ENST00000297354 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
SBSPON-201ENST00000297354 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
SBSPON-201ENST00000297354 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -2
SBSPON-201ENST00000297354 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
SBSPON-201ENST00000297354 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
SBSPON-201ENST00000297354 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
SBSPON-201ENST00000297354 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
SBSPON-201ENST00000297354 PHGR1C9JFL3 82 aa2.09□□□□□ -2.08
SBSPON-201ENST00000297354 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 67.9 ms