RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 KRTAP4-7Q9BYR0 210 aa7.5□□□□□ -1.21
SOX17-201ENST00000297316 SYNE2Q8WXH0 6885 aaKnown RBP7.49□□□□□ -1.21
SOX17-201ENST00000297316 SPRR2FQ96RM1 72 aa7.46□□□□□ -1.21
SOX17-201ENST00000297316 KRTAP9-6A0A140TA67 174 aa7.35□□□□□ -1.23
SOX17-201ENST00000297316 KRTAP9-6A8MVA2 160 aa7.35□□□□□ -1.23
SOX17-201ENST00000297316 KRTAP19-3Q7Z4W3 81 aa7.33□□□□□ -1.24
SOX17-201ENST00000297316 KRTAP19-4Q3LI73 84 aa7.27□□□□□ -1.25
SOX17-201ENST00000297316 KRTAP4-3Q9BYR4 195 aa7.25□□□□□ -1.25
SOX17-201ENST00000297316 MDN1Q9NU22 5596 aa7.24□□□□□ -1.25
SOX17-201ENST00000297316 KRTAP5-9P26371 169 aa7.24□□□□□ -1.25
SOX17-201ENST00000297316 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.23□□□□□ -1.25
SOX17-201ENST00000297316 MT1GP13640 62 aa7.23□□□□□ -1.25
SOX17-201ENST00000297316 MT1MQ8N339 61 aa7.23□□□□□ -1.25
SOX17-201ENST00000297316 LCE5AQ5TCM9 118 aa7.19□□□□□ -1.26
SOX17-201ENST00000297316 LCE1AQ5T7P2 110 aa7.1□□□□□ -1.27
SOX17-201ENST00000297316 DSTQ03001 7570 aaKnown RBP7.04□□□□□ -1.28
SOX17-201ENST00000297316 LOC100996750A0A140TA64 210 aa7.02□□□□□ -1.28
SOX17-201ENST00000297316 KRTAP6-3Q3LI67 103 aa7.02□□□□□ -1.28
SOX17-201ENST00000297316 SPRR2EP22531 72 aa7.02□□□□□ -1.29
SOX17-201ENST00000297316 SPRR2BP35325 72 aa7.02□□□□□ -1.29
SOX17-201ENST00000297316 SPRR2AP35326 72 aa7.02□□□□□ -1.29
SOX17-201ENST00000297316 KRTAP2-3P0C7H8 128 aa6.87□□□□□ -1.31
SOX17-201ENST00000297316 KRTAP2-4Q9BYR9 128 aa6.87□□□□□ -1.31
SOX17-201ENST00000297316 KRTAP2-1Q9BYU5 128 aa6.87□□□□□ -1.31
SOX17-201ENST00000297316 KRTAP9-7A8MTY7 169 aa6.77□□□□□ -1.33
SOX17-201ENST00000297316 SPRR2DP22532 72 aa6.74□□□□□ -1.33
SOX17-201ENST00000297316 NEBP20929 6669 aa6.58□□□□□ -1.36
SOX17-201ENST00000297316 KRTAP5-5Q701N2 237 aaPredicted RBP6.48□□□□□ -1.37
SOX17-201ENST00000297316 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
SOX17-201ENST00000297316 KRTAP6-1Q3LI64 71 aa6.42□□□□□ -1.38
SOX17-201ENST00000297316 MT1AP04731 61 aa6.36□□□□□ -1.39
SOX17-201ENST00000297316 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
SOX17-201ENST00000297316 KRTAP4-9Q9BYQ8 210 aa6.1□□□□□ -1.43
SOX17-201ENST00000297316 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
SOX17-201ENST00000297316 KRTAP5-4Q6L8H1 288 aa6.08□□□□□ -1.44
SOX17-201ENST00000297316 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
SOX17-201ENST00000297316 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
SOX17-201ENST00000297316 KRTAP20-1Q3LI63 56 aa5.98□□□□□ -1.45
SOX17-201ENST00000297316 MT4P47944 62 aa5.94□□□□□ -1.46
SOX17-201ENST00000297316 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
SOX17-201ENST00000297316 LCE4AQ5TA78 99 aa5.88□□□□□ -1.47
SOX17-201ENST00000297316 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
SOX17-201ENST00000297316 LCE1DQ5T752 114 aa5.76□□□□□ -1.49
SOX17-201ENST00000297316 HMCN1Q96RW7 5635 aa5.76□□□□□ -1.49
SOX17-201ENST00000297316 LCE3DQ9BYE3 92 aa5.75□□□□□ -1.49
SOX17-201ENST00000297316 MT3P25713 68 aa5.74□□□□□ -1.49
SOX17-201ENST00000297316 KRTAP20-2Q3LI61 65 aa5.73□□□□□ -1.49
SOX17-201ENST00000297316 LCE3EQ5T5B0 92 aa5.62□□□□□ -1.51
SOX17-201ENST00000297316 OBSCNQ5VST9 7968 aa5.62□□□□□ -1.51
SOX17-201ENST00000297316 KRTAP5-2Q701N4 177 aa5.54□□□□□ -1.52
SOX17-201ENST00000297316 KRTAP5-3Q6L8H2 238 aa5.51□□□□□ -1.53
SOX17-201ENST00000297316 PRM1P04553 51 aa5.4□□□□□ -1.55
SOX17-201ENST00000297316 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
SOX17-201ENST00000297316 KRTAP4-11Q9BYQ6 195 aa4.92□□□□□ -1.62
SOX17-201ENST00000297316 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
SOX17-201ENST00000297316 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
SOX17-201ENST00000297316 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
SOX17-201ENST00000297316 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
SOX17-201ENST00000297316 KRTAP5-8O75690 187 aa4.75□□□□□ -1.65
SOX17-201ENST00000297316 KRTAP5-10Q6L8G5 202 aa4.68□□□□□ -1.66
SOX17-201ENST00000297316 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
SOX17-201ENST00000297316 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
SOX17-201ENST00000297316 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
SOX17-201ENST00000297316 LCE1FQ5T754 118 aa4.4□□□□□ -1.7
SOX17-201ENST00000297316 GPR98Q8WXG9 6306 aa4.35□□□□□ -1.71
SOX17-201ENST00000297316 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
SOX17-201ENST00000297316 MUC5BQ9HC84 5762 aaPredicted RBP4.2□□□□□ -1.74
SOX17-201ENST00000297316 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
SOX17-201ENST00000297316 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
SOX17-201ENST00000297316 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
SOX17-201ENST00000297316 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
SOX17-201ENST00000297316 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
SOX17-201ENST00000297316 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
SOX17-201ENST00000297316 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
SOX17-201ENST00000297316 KRTAP21-1Q3LI58 79 aa3.39□□□□□ -1.87
SOX17-201ENST00000297316 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
SOX17-201ENST00000297316 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms