RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 KRTAP2-3P0C7H8 128 aa6.8□□□□□ -1.32
TRA2A-201ENST00000297071 KRTAP2-4Q9BYR9 128 aa6.8□□□□□ -1.32
TRA2A-201ENST00000297071 KRTAP2-1Q9BYU5 128 aa6.8□□□□□ -1.32
TRA2A-201ENST00000297071 KRTAP9-6A8MVA2 160 aa6.76□□□□□ -1.33
TRA2A-201ENST00000297071 KRTAP19-7Q3SYF9 63 aa6.72□□□□□ -1.33
TRA2A-201ENST00000297071 KRTAP19-6Q3LI70 58 aa6.71□□□□□ -1.34
TRA2A-201ENST00000297071 GPR98Q8WXG9 6306 aa6.69□□□□□ -1.34
TRA2A-201ENST00000297071 MUC12Q9UKN1 5478 aa6.67□□□□□ -1.34
TRA2A-201ENST00000297071 KRTAP4-8A0A0G2JLE6 195 aa6.66□□□□□ -1.34
TRA2A-201ENST00000297071 KRTAP4-8Q9BYQ9 185 aa6.66□□□□□ -1.34
TRA2A-201ENST00000297071 MT1LQ93083 61 aa6.57□□□□□ -1.36
TRA2A-201ENST00000297071 MT1EP04732 61 aa6.53□□□□□ -1.36
TRA2A-201ENST00000297071 KRTAP4-7Q9BYR0 210 aa6.46□□□□□ -1.37
TRA2A-201ENST00000297071 KMT2DO14686 5537 aa6.46□□□□□ -1.38
TRA2A-201ENST00000297071 LOC100996750A0A140TA64 210 aa6.45□□□□□ -1.38
TRA2A-201ENST00000297071 KRTAP4-6Q9BYQ5 205 aa6.45□□□□□ -1.38
TRA2A-201ENST00000297071 KRTAP2-2Q9BYT5 123 aa6.39□□□□□ -1.39
TRA2A-201ENST00000297071 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
TRA2A-201ENST00000297071 MDN1Q9NU22 5596 aa6.33□□□□□ -1.4
TRA2A-201ENST00000297071 MT1GP13640 62 aa6.11□□□□□ -1.43
TRA2A-201ENST00000297071 MT1MQ8N339 61 aa6.08□□□□□ -1.44
TRA2A-201ENST00000297071 KRTAP19-3Q7Z4W3 81 aa6.06□□□□□ -1.44
TRA2A-201ENST00000297071 SPRR2EP22531 72 aa6.04□□□□□ -1.44
TRA2A-201ENST00000297071 SPRR2BP35325 72 aa6.04□□□□□ -1.44
TRA2A-201ENST00000297071 SPRR2AP35326 72 aa6.04□□□□□ -1.44
TRA2A-201ENST00000297071 KRTAP4-3Q9BYR4 195 aa5.98□□□□□ -1.45
TRA2A-201ENST00000297071 KRTAP12-4P60329 112 aa5.93□□□□□ -1.46
TRA2A-201ENST00000297071 SPRR2DP22532 72 aa5.86□□□□□ -1.47
TRA2A-201ENST00000297071 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
TRA2A-201ENST00000297071 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
TRA2A-201ENST00000297071 MT1AP04731 61 aa5.8□□□□□ -1.48
TRA2A-201ENST00000297071 LCE1AQ5T7P2 110 aa5.8□□□□□ -1.48
TRA2A-201ENST00000297071 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
TRA2A-201ENST00000297071 AHNAK2Q8IVF2 5795 aa5.66□□□□□ -1.5
TRA2A-201ENST00000297071 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
TRA2A-201ENST00000297071 KRTAP5-10Q6L8G5 202 aa5.62□□□□□ -1.51
TRA2A-201ENST00000297071 KRTAP5-7Q6L8G8 165 aa5.59□□□□□ -1.51
TRA2A-201ENST00000297071 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.51
TRA2A-201ENST00000297071 HMCN1Q96RW7 5635 aa5.53□□□□□ -1.52
TRA2A-201ENST00000297071 KRTAP6-1Q3LI64 71 aa5.51□□□□□ -1.53
TRA2A-201ENST00000297071 LCE3DQ9BYE3 92 aa5.5□□□□□ -1.53
TRA2A-201ENST00000297071 LCE3EQ5T5B0 92 aa5.48□□□□□ -1.53
TRA2A-201ENST00000297071 KRTAP4-12Q9BQ66 201 aa5.41□□□□□ -1.54
TRA2A-201ENST00000297071 LCE1DQ5T752 114 aa5.4□□□□□ -1.54
TRA2A-201ENST00000297071 KRTAP5-5Q701N2 237 aaPredicted RBP5.4□□□□□ -1.54
TRA2A-201ENST00000297071 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
TRA2A-201ENST00000297071 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
TRA2A-201ENST00000297071 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
TRA2A-201ENST00000297071 PRM1P04553 51 aa5.26□□□□□ -1.57
TRA2A-201ENST00000297071 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
TRA2A-201ENST00000297071 MT4P47944 62 aa5.17□□□□□ -1.58
TRA2A-201ENST00000297071 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
TRA2A-201ENST00000297071 AHNAKQ09666 5890 aaKnown RBP5.14□□□□□ -1.59
TRA2A-201ENST00000297071 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
TRA2A-201ENST00000297071 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
TRA2A-201ENST00000297071 MT3P25713 68 aa4.98□□□□□ -1.61
TRA2A-201ENST00000297071 MUC5BQ9HC84 5762 aaPredicted RBP4.95□□□□□ -1.62
TRA2A-201ENST00000297071 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
TRA2A-201ENST00000297071 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
TRA2A-201ENST00000297071 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
TRA2A-201ENST00000297071 KRTAP20-2Q3LI61 65 aa4.6□□□□□ -1.67
TRA2A-201ENST00000297071 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
TRA2A-201ENST00000297071 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
TRA2A-201ENST00000297071 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
TRA2A-201ENST00000297071 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
TRA2A-201ENST00000297071 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
TRA2A-201ENST00000297071 LCE1CQ5T751 118 aa3.84□□□□□ -1.8
TRA2A-201ENST00000297071 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.8
TRA2A-201ENST00000297071 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
TRA2A-201ENST00000297071 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
TRA2A-201ENST00000297071 KRTAP21-1Q3LI58 79 aa3.47□□□□□ -1.85
TRA2A-201ENST00000297071 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
TRA2A-201ENST00000297071 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
TRA2A-201ENST00000297071 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
TRA2A-201ENST00000297071 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
TRA2A-201ENST00000297071 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
TRA2A-201ENST00000297071 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms