RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 KRTAP19-7Q3SYF9 63 aa4.56□□□□□ -1.68
TNFRSF21-201ENST00000296861 MT1GP13640 62 aa4.52□□□□□ -1.69
TNFRSF21-201ENST00000296861 MT1LQ93083 61 aa4.48□□□□□ -1.69
TNFRSF21-201ENST00000296861 MT1EP04732 61 aa4.44□□□□□ -1.7
TNFRSF21-201ENST00000296861 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
TNFRSF21-201ENST00000296861 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
TNFRSF21-201ENST00000296861 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
TNFRSF21-201ENST00000296861 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
TNFRSF21-201ENST00000296861 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.7
TNFRSF21-201ENST00000296861 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
TNFRSF21-201ENST00000296861 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
TNFRSF21-201ENST00000296861 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
TNFRSF21-201ENST00000296861 SPRR2FQ96RM1 72 aa4.32□□□□□ -1.72
TNFRSF21-201ENST00000296861 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
TNFRSF21-201ENST00000296861 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
TNFRSF21-201ENST00000296861 MT1MQ8N339 61 aa4.19□□□□□ -1.74
TNFRSF21-201ENST00000296861 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
TNFRSF21-201ENST00000296861 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
TNFRSF21-201ENST00000296861 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
TNFRSF21-201ENST00000296861 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.74
TNFRSF21-201ENST00000296861 SPRR2EP22531 72 aa3.95□□□□□ -1.78
TNFRSF21-201ENST00000296861 SPRR2BP35325 72 aa3.95□□□□□ -1.78
TNFRSF21-201ENST00000296861 SPRR2AP35326 72 aa3.95□□□□□ -1.78
TNFRSF21-201ENST00000296861 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
TNFRSF21-201ENST00000296861 LCE5AQ5TCM9 118 aa3.92□□□□□ -1.78
TNFRSF21-201ENST00000296861 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
TNFRSF21-201ENST00000296861 KRTAP9-7A8MTY7 169 aa3.86□□□□□ -1.79
TNFRSF21-201ENST00000296861 PRM1P04553 51 aa3.85□□□□□ -1.79
TNFRSF21-201ENST00000296861 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.8
TNFRSF21-201ENST00000296861 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
TNFRSF21-201ENST00000296861 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
TNFRSF21-201ENST00000296861 SPRR2DP22532 72 aa3.77□□□□□ -1.81
TNFRSF21-201ENST00000296861 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
TNFRSF21-201ENST00000296861 MT1AP04731 61 aa3.69□□□□□ -1.82
TNFRSF21-201ENST00000296861 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.68□□□□□ -1.82
TNFRSF21-201ENST00000296861 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
TNFRSF21-201ENST00000296861 KRTAP9-6A0A140TA67 174 aa3.65□□□□□ -1.83
TNFRSF21-201ENST00000296861 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.83
TNFRSF21-201ENST00000296861 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
TNFRSF21-201ENST00000296861 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
TNFRSF21-201ENST00000296861 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
TNFRSF21-201ENST00000296861 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
TNFRSF21-201ENST00000296861 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.85
TNFRSF21-201ENST00000296861 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
TNFRSF21-201ENST00000296861 MT4P47944 62 aa3.46□□□□□ -1.86
TNFRSF21-201ENST00000296861 MT3P25713 68 aa3.45□□□□□ -1.86
TNFRSF21-201ENST00000296861 NEBP20929 6669 aa3.36□□□□□ -1.87
TNFRSF21-201ENST00000296861 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
TNFRSF21-201ENST00000296861 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
TNFRSF21-201ENST00000296861 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
TNFRSF21-201ENST00000296861 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
TNFRSF21-201ENST00000296861 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
TNFRSF21-201ENST00000296861 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
TNFRSF21-201ENST00000296861 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
TNFRSF21-201ENST00000296861 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
TNFRSF21-201ENST00000296861 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
TNFRSF21-201ENST00000296861 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
TNFRSF21-201ENST00000296861 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
TNFRSF21-201ENST00000296861 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
TNFRSF21-201ENST00000296861 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
TNFRSF21-201ENST00000296861 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
TNFRSF21-201ENST00000296861 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
TNFRSF21-201ENST00000296861 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
TNFRSF21-201ENST00000296861 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
TNFRSF21-201ENST00000296861 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
TNFRSF21-201ENST00000296861 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
TNFRSF21-201ENST00000296861 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
TNFRSF21-201ENST00000296861 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
TNFRSF21-201ENST00000296861 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
TNFRSF21-201ENST00000296861 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.04
TNFRSF21-201ENST00000296861 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
TNFRSF21-201ENST00000296861 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
TNFRSF21-201ENST00000296861 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
TNFRSF21-201ENST00000296861 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
TNFRSF21-201ENST00000296861 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
TNFRSF21-201ENST00000296861 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
TNFRSF21-201ENST00000296861 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 117.8 ms