RNA–Protein interactions for RNA: ENST00000296799.8

ARHGEF28-202, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF28, Length 4,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-202ENST00000296799 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
ARHGEF28-202ENST00000296799 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
ARHGEF28-202ENST00000296799 MT1LQ93083 61 aa5.06□□□□□ -1.6
ARHGEF28-202ENST00000296799 MT1EP04732 61 aa5.05□□□□□ -1.6
ARHGEF28-202ENST00000296799 SYNE2Q8WXH0 6885 aaKnown RBP5.02□□□□□ -1.61
ARHGEF28-202ENST00000296799 KRTAP9-6A0A140TA67 174 aa5.01□□□□□ -1.61
ARHGEF28-202ENST00000296799 KRTAP12-4P60329 112 aa5□□□□□ -1.61
ARHGEF28-202ENST00000296799 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
ARHGEF28-202ENST00000296799 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
ARHGEF28-202ENST00000296799 MT1MQ8N339 61 aa4.87□□□□□ -1.63
ARHGEF28-202ENST00000296799 KMT2DO14686 5537 aa4.85□□□□□ -1.63
ARHGEF28-202ENST00000296799 USH2AO75445 5202 aa4.84□□□□□ -1.63
ARHGEF28-202ENST00000296799 KRTAP19-7Q3SYF9 63 aa4.82□□□□□ -1.64
ARHGEF28-202ENST00000296799 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
ARHGEF28-202ENST00000296799 MACF1Q9UPN3 7388 aaKnown RBP4.79□□□□□ -1.64
ARHGEF28-202ENST00000296799 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
ARHGEF28-202ENST00000296799 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
ARHGEF28-202ENST00000296799 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
ARHGEF28-202ENST00000296799 LCE3EQ5T5B0 92 aa4.71□□□□□ -1.66
ARHGEF28-202ENST00000296799 FCGBPQ9Y6R7 5405 aaPredicted RBP4.68□□□□□ -1.66
ARHGEF28-202ENST00000296799 MT4P47944 62 aa4.6□□□□□ -1.67
ARHGEF28-202ENST00000296799 MT3P25713 68 aa4.58□□□□□ -1.68
ARHGEF28-202ENST00000296799 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.55□□□□□ -1.68
ARHGEF28-202ENST00000296799 MT1AP04731 61 aa4.46□□□□□ -1.7
ARHGEF28-202ENST00000296799 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
ARHGEF28-202ENST00000296799 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
ARHGEF28-202ENST00000296799 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
ARHGEF28-202ENST00000296799 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
ARHGEF28-202ENST00000296799 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
ARHGEF28-202ENST00000296799 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
ARHGEF28-202ENST00000296799 KRTAP20-1Q3LI63 56 aa4.38□□□□□ -1.71
ARHGEF28-202ENST00000296799 KRTAP2-3P0C7H8 128 aa4.37□□□□□ -1.71
ARHGEF28-202ENST00000296799 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
ARHGEF28-202ENST00000296799 KRTAP2-1Q9BYU5 128 aa4.37□□□□□ -1.71
ARHGEF28-202ENST00000296799 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
ARHGEF28-202ENST00000296799 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
ARHGEF28-202ENST00000296799 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
ARHGEF28-202ENST00000296799 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
ARHGEF28-202ENST00000296799 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
ARHGEF28-202ENST00000296799 PRM1P04553 51 aa4.25□□□□□ -1.73
ARHGEF28-202ENST00000296799 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
ARHGEF28-202ENST00000296799 NEBP20929 6669 aa4.12□□□□□ -1.75
ARHGEF28-202ENST00000296799 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
ARHGEF28-202ENST00000296799 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
ARHGEF28-202ENST00000296799 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
ARHGEF28-202ENST00000296799 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
ARHGEF28-202ENST00000296799 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
ARHGEF28-202ENST00000296799 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
ARHGEF28-202ENST00000296799 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
ARHGEF28-202ENST00000296799 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
ARHGEF28-202ENST00000296799 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
ARHGEF28-202ENST00000296799 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
ARHGEF28-202ENST00000296799 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
ARHGEF28-202ENST00000296799 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
ARHGEF28-202ENST00000296799 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
ARHGEF28-202ENST00000296799 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
ARHGEF28-202ENST00000296799 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
ARHGEF28-202ENST00000296799 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
ARHGEF28-202ENST00000296799 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
ARHGEF28-202ENST00000296799 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
ARHGEF28-202ENST00000296799 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
ARHGEF28-202ENST00000296799 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.92
ARHGEF28-202ENST00000296799 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.92
ARHGEF28-202ENST00000296799 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
ARHGEF28-202ENST00000296799 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
ARHGEF28-202ENST00000296799 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
ARHGEF28-202ENST00000296799 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
ARHGEF28-202ENST00000296799 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
ARHGEF28-202ENST00000296799 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
ARHGEF28-202ENST00000296799 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
ARHGEF28-202ENST00000296799 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
ARHGEF28-202ENST00000296799 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
ARHGEF28-202ENST00000296799 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
ARHGEF28-202ENST00000296799 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
ARHGEF28-202ENST00000296799 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
ARHGEF28-202ENST00000296799 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
ARHGEF28-202ENST00000296799 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms