RNA–Protein interactions for RNA: ENST00000296658.3

CMBL-201, Transcript of carboxymethylenebutenolidase homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMBL, Length 2,335 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMBL-201ENST00000296658 MT1EP04732 61 aa5.19□□□□□ -1.58
CMBL-201ENST00000296658 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
CMBL-201ENST00000296658 KRTAP5-9P26371 169 aa5.14□□□□□ -1.59
CMBL-201ENST00000296658 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
CMBL-201ENST00000296658 MT1LQ93083 61 aa5.09□□□□□ -1.59
CMBL-201ENST00000296658 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.59
CMBL-201ENST00000296658 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.59
CMBL-201ENST00000296658 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
CMBL-201ENST00000296658 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
CMBL-201ENST00000296658 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
CMBL-201ENST00000296658 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
CMBL-201ENST00000296658 KRTAP19-3Q7Z4W3 81 aa5.01□□□□□ -1.61
CMBL-201ENST00000296658 MUC12Q9UKN1 5478 aa4.99□□□□□ -1.61
CMBL-201ENST00000296658 MT1GP13640 62 aa4.97□□□□□ -1.61
CMBL-201ENST00000296658 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
CMBL-201ENST00000296658 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
CMBL-201ENST00000296658 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
CMBL-201ENST00000296658 SPRR2EP22531 72 aa4.9□□□□□ -1.63
CMBL-201ENST00000296658 SPRR2BP35325 72 aa4.9□□□□□ -1.63
CMBL-201ENST00000296658 SPRR2AP35326 72 aa4.9□□□□□ -1.63
CMBL-201ENST00000296658 MT1MQ8N339 61 aa4.89□□□□□ -1.63
CMBL-201ENST00000296658 KRTAP4-3Q9BYR4 195 aa4.86□□□□□ -1.63
CMBL-201ENST00000296658 MDN1Q9NU22 5596 aa4.84□□□□□ -1.63
CMBL-201ENST00000296658 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
CMBL-201ENST00000296658 NEBP20929 6669 aa4.73□□□□□ -1.65
CMBL-201ENST00000296658 SPRR2DP22532 72 aa4.72□□□□□ -1.65
CMBL-201ENST00000296658 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
CMBL-201ENST00000296658 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
CMBL-201ENST00000296658 KRTAP4-6Q9BYQ5 205 aa4.47□□□□□ -1.69
CMBL-201ENST00000296658 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
CMBL-201ENST00000296658 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
CMBL-201ENST00000296658 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.7
CMBL-201ENST00000296658 KRTAP20-1Q3LI63 56 aa4.38□□□□□ -1.71
CMBL-201ENST00000296658 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
CMBL-201ENST00000296658 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
CMBL-201ENST00000296658 MT1AP04731 61 aa4.33□□□□□ -1.72
CMBL-201ENST00000296658 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
CMBL-201ENST00000296658 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
CMBL-201ENST00000296658 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
CMBL-201ENST00000296658 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
CMBL-201ENST00000296658 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
CMBL-201ENST00000296658 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
CMBL-201ENST00000296658 LCE3EQ5T5B0 92 aa4.08□□□□□ -1.76
CMBL-201ENST00000296658 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
CMBL-201ENST00000296658 MT4P47944 62 aa4.07□□□□□ -1.76
CMBL-201ENST00000296658 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
CMBL-201ENST00000296658 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
CMBL-201ENST00000296658 PRM1P04553 51 aa3.94□□□□□ -1.78
CMBL-201ENST00000296658 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
CMBL-201ENST00000296658 MT3P25713 68 aa3.93□□□□□ -1.78
CMBL-201ENST00000296658 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
CMBL-201ENST00000296658 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
CMBL-201ENST00000296658 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
CMBL-201ENST00000296658 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
CMBL-201ENST00000296658 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
CMBL-201ENST00000296658 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
CMBL-201ENST00000296658 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
CMBL-201ENST00000296658 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
CMBL-201ENST00000296658 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
CMBL-201ENST00000296658 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
CMBL-201ENST00000296658 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
CMBL-201ENST00000296658 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
CMBL-201ENST00000296658 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
CMBL-201ENST00000296658 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
CMBL-201ENST00000296658 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
CMBL-201ENST00000296658 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
CMBL-201ENST00000296658 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
CMBL-201ENST00000296658 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
CMBL-201ENST00000296658 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
CMBL-201ENST00000296658 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
CMBL-201ENST00000296658 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
CMBL-201ENST00000296658 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
CMBL-201ENST00000296658 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
CMBL-201ENST00000296658 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
CMBL-201ENST00000296658 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
CMBL-201ENST00000296658 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
CMBL-201ENST00000296658 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 106.3 ms