RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
ITGB5-201ENST00000296181 KRTAP19-7Q3SYF9 63 aa5.94□□□□□ -1.46
ITGB5-201ENST00000296181 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
ITGB5-201ENST00000296181 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
ITGB5-201ENST00000296181 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
ITGB5-201ENST00000296181 FCGBPQ9Y6R7 5405 aaPredicted RBP5.9□□□□□ -1.46
ITGB5-201ENST00000296181 KRTAP19-3Q7Z4W3 81 aa5.85□□□□□ -1.47
ITGB5-201ENST00000296181 LCE3DQ9BYE3 92 aa5.81□□□□□ -1.48
ITGB5-201ENST00000296181 SPRR2EP22531 72 aa5.8□□□□□ -1.48
ITGB5-201ENST00000296181 SPRR2BP35325 72 aa5.8□□□□□ -1.48
ITGB5-201ENST00000296181 SPRR2AP35326 72 aa5.8□□□□□ -1.48
ITGB5-201ENST00000296181 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
ITGB5-201ENST00000296181 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
ITGB5-201ENST00000296181 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
ITGB5-201ENST00000296181 MT1MQ8N339 61 aa5.74□□□□□ -1.49
ITGB5-201ENST00000296181 KRTAP19-6Q3LI70 58 aa5.74□□□□□ -1.49
ITGB5-201ENST00000296181 LCE3EQ5T5B0 92 aa5.72□□□□□ -1.49
ITGB5-201ENST00000296181 SYNE2Q8WXH0 6885 aaKnown RBP5.64□□□□□ -1.51
ITGB5-201ENST00000296181 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
ITGB5-201ENST00000296181 SPRR2DP22532 72 aa5.55□□□□□ -1.52
ITGB5-201ENST00000296181 MUC12Q9UKN1 5478 aa5.54□□□□□ -1.52
ITGB5-201ENST00000296181 PRM1P04553 51 aa5.51□□□□□ -1.53
ITGB5-201ENST00000296181 SSPOA2VEC9 5147 aa5.41□□□□□ -1.54
ITGB5-201ENST00000296181 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
ITGB5-201ENST00000296181 LCE2DQ5TA82 110 aaPredicted RBP5.32□□□□□ -1.56
ITGB5-201ENST00000296181 MT1AP04731 61 aa5.23□□□□□ -1.57
ITGB5-201ENST00000296181 KRTAP6-1Q3LI64 71 aa5.22□□□□□ -1.57
ITGB5-201ENST00000296181 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.57
ITGB5-201ENST00000296181 MT3P25713 68 aa5.18□□□□□ -1.58
ITGB5-201ENST00000296181 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
ITGB5-201ENST00000296181 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
ITGB5-201ENST00000296181 MT4P47944 62 aa5.09□□□□□ -1.6
ITGB5-201ENST00000296181 LCE1AQ5T7P2 110 aa5.03□□□□□ -1.6
ITGB5-201ENST00000296181 KRTAP6-2Q3LI66 62 aa5□□□□□ -1.61
ITGB5-201ENST00000296181 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
ITGB5-201ENST00000296181 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
ITGB5-201ENST00000296181 LCE1BQ5T7P3 118 aa4.81□□□□□ -1.64
ITGB5-201ENST00000296181 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
ITGB5-201ENST00000296181 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
ITGB5-201ENST00000296181 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.74□□□□□ -1.65
ITGB5-201ENST00000296181 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
ITGB5-201ENST00000296181 MUC19Q7Z5P9 8384 aa4.55□□□□□ -1.68
ITGB5-201ENST00000296181 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
ITGB5-201ENST00000296181 KRTAP2-2Q9BYT5 123 aa4.53□□□□□ -1.68
ITGB5-201ENST00000296181 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
ITGB5-201ENST00000296181 KRTAP4-6Q9BYQ5 205 aa4.34□□□□□ -1.71
ITGB5-201ENST00000296181 NEBP20929 6669 aa4.32□□□□□ -1.72
ITGB5-201ENST00000296181 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
ITGB5-201ENST00000296181 KRTAP20-1Q3LI63 56 aa4.3□□□□□ -1.72
ITGB5-201ENST00000296181 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
ITGB5-201ENST00000296181 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
ITGB5-201ENST00000296181 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
ITGB5-201ENST00000296181 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
ITGB5-201ENST00000296181 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
ITGB5-201ENST00000296181 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
ITGB5-201ENST00000296181 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
ITGB5-201ENST00000296181 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
ITGB5-201ENST00000296181 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
ITGB5-201ENST00000296181 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
ITGB5-201ENST00000296181 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
ITGB5-201ENST00000296181 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
ITGB5-201ENST00000296181 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
ITGB5-201ENST00000296181 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
ITGB5-201ENST00000296181 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
ITGB5-201ENST00000296181 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
ITGB5-201ENST00000296181 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.88
ITGB5-201ENST00000296181 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
ITGB5-201ENST00000296181 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
ITGB5-201ENST00000296181 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
ITGB5-201ENST00000296181 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
ITGB5-201ENST00000296181 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
ITGB5-201ENST00000296181 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
ITGB5-201ENST00000296181 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
ITGB5-201ENST00000296181 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
ITGB5-201ENST00000296181 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
ITGB5-201ENST00000296181 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
ITGB5-201ENST00000296181 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 61.6 ms