RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 LCE2DQ5TA82 110 aaPredicted RBP5.38□□□□□ -1.55
CDCP1-201ENST00000296129 LCE2AQ5TA79 106 aaPredicted RBP5.38□□□□□ -1.55
CDCP1-201ENST00000296129 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
CDCP1-201ENST00000296129 FAT4Q6V0I7 4981 aa5.36□□□□□ -1.55
CDCP1-201ENST00000296129 MT4P47944 62 aa5.27□□□□□ -1.57
CDCP1-201ENST00000296129 RNF213Q63HN8 5207 aa5.27□□□□□ -1.57
CDCP1-201ENST00000296129 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
CDCP1-201ENST00000296129 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
CDCP1-201ENST00000296129 MT3P25713 68 aa5.22□□□□□ -1.57
CDCP1-201ENST00000296129 KRTAP9-6A0A140TA67 174 aa5.14□□□□□ -1.59
CDCP1-201ENST00000296129 UBR4Q5T4S7 5183 aa5.1□□□□□ -1.59
CDCP1-201ENST00000296129 PRM1P04553 51 aa5.08□□□□□ -1.6
CDCP1-201ENST00000296129 FSIP2Q5CZC0 6907 aa5.06□□□□□ -1.6
CDCP1-201ENST00000296129 MT1AP04731 61 aa5.03□□□□□ -1.6
CDCP1-201ENST00000296129 LCE1DQ5T752 114 aa4.97□□□□□ -1.61
CDCP1-201ENST00000296129 LCE1BQ5T7P3 118 aa4.97□□□□□ -1.61
CDCP1-201ENST00000296129 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
CDCP1-201ENST00000296129 KRTAP2-3P0C7H8 128 aa4.94□□□□□ -1.62
CDCP1-201ENST00000296129 KRTAP2-4Q9BYR9 128 aa4.94□□□□□ -1.62
CDCP1-201ENST00000296129 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
CDCP1-201ENST00000296129 MUC2Q02817 5179 aa4.86□□□□□ -1.63
CDCP1-201ENST00000296129 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.63
CDCP1-201ENST00000296129 KRTAP20-1Q3LI63 56 aa4.84□□□□□ -1.63
CDCP1-201ENST00000296129 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.64
CDCP1-201ENST00000296129 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
CDCP1-201ENST00000296129 SYNE2Q8WXH0 6885 aaKnown RBP4.82□□□□□ -1.64
CDCP1-201ENST00000296129 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
CDCP1-201ENST00000296129 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
CDCP1-201ENST00000296129 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
CDCP1-201ENST00000296129 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.74□□□□□ -1.65
CDCP1-201ENST00000296129 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
CDCP1-201ENST00000296129 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
CDCP1-201ENST00000296129 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
CDCP1-201ENST00000296129 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
CDCP1-201ENST00000296129 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
CDCP1-201ENST00000296129 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
CDCP1-201ENST00000296129 USH2AO75445 5202 aa4.42□□□□□ -1.7
CDCP1-201ENST00000296129 KMT2DO14686 5537 aa4.32□□□□□ -1.72
CDCP1-201ENST00000296129 FCGBPQ9Y6R7 5405 aaPredicted RBP4.22□□□□□ -1.73
CDCP1-201ENST00000296129 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
CDCP1-201ENST00000296129 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
CDCP1-201ENST00000296129 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
CDCP1-201ENST00000296129 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
CDCP1-201ENST00000296129 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
CDCP1-201ENST00000296129 SSPOA2VEC9 5147 aa4.13□□□□□ -1.75
CDCP1-201ENST00000296129 NEBP20929 6669 aa4.02□□□□□ -1.77
CDCP1-201ENST00000296129 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
CDCP1-201ENST00000296129 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
CDCP1-201ENST00000296129 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
CDCP1-201ENST00000296129 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
CDCP1-201ENST00000296129 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.78
CDCP1-201ENST00000296129 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
CDCP1-201ENST00000296129 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
CDCP1-201ENST00000296129 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
CDCP1-201ENST00000296129 MDN1Q9NU22 5596 aa3.56□□□□□ -1.84
CDCP1-201ENST00000296129 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
CDCP1-201ENST00000296129 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
CDCP1-201ENST00000296129 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
CDCP1-201ENST00000296129 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
CDCP1-201ENST00000296129 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
CDCP1-201ENST00000296129 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
CDCP1-201ENST00000296129 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
CDCP1-201ENST00000296129 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
CDCP1-201ENST00000296129 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
CDCP1-201ENST00000296129 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
CDCP1-201ENST00000296129 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
CDCP1-201ENST00000296129 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
CDCP1-201ENST00000296129 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
CDCP1-201ENST00000296129 PHGR1C9JFL3 82 aa2.57□□□□□ -2
CDCP1-201ENST00000296129 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
CDCP1-201ENST00000296129 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
CDCP1-201ENST00000296129 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
CDCP1-201ENST00000296129 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
CDCP1-201ENST00000296129 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
CDCP1-201ENST00000296129 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
CDCP1-201ENST00000296129 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
CDCP1-201ENST00000296129 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 45.9 ms