RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.94□□□□□ -1.14
PTX3-201ENST00000295927 KRTAP5-9P26371 169 aa7.94□□□□□ -1.14
PTX3-201ENST00000295927 KRTAP19-3Q7Z4W3 81 aa7.93□□□□□ -1.14
PTX3-201ENST00000295927 KRTAP4-7Q9BYR0 210 aa7.92□□□□□ -1.14
PTX3-201ENST00000295927 MT1GP13640 62 aa7.86□□□□□ -1.15
PTX3-201ENST00000295927 LUZP6Q538Z0 58 aa7.86□□□□□ -1.15
PTX3-201ENST00000295927 NDUFAF8A1L188 74 aa7.86□□□□□ -1.15
PTX3-201ENST00000295927 MT1MQ8N339 61 aa7.8□□□□□ -1.16
PTX3-201ENST00000295927 LCE5AQ5TCM9 118 aa7.79□□□□□ -1.16
PTX3-201ENST00000295927 KRTAP6-3Q3LI67 103 aa7.78□□□□□ -1.16
PTX3-201ENST00000295927 LCE1AQ5T7P2 110 aa7.71□□□□□ -1.18
PTX3-201ENST00000295927 MDN1Q9NU22 5596 aa7.69□□□□□ -1.18
PTX3-201ENST00000295927 KRTAP4-3Q9BYR4 195 aa7.69□□□□□ -1.18
PTX3-201ENST00000295927 KRTAP9-6A8MVA2 160 aa7.66□□□□□ -1.18
PTX3-201ENST00000295927 SPRR2EP22531 72 aa7.64□□□□□ -1.19
PTX3-201ENST00000295927 SPRR2BP35325 72 aa7.64□□□□□ -1.19
PTX3-201ENST00000295927 SPRR2AP35326 72 aa7.64□□□□□ -1.19
PTX3-201ENST00000295927 KRTAP9-7A8MTY7 169 aa7.48□□□□□ -1.21
PTX3-201ENST00000295927 LOC100996750A0A140TA64 210 aa7.43□□□□□ -1.22
PTX3-201ENST00000295927 SPRR2DP22532 72 aa7.36□□□□□ -1.23
PTX3-201ENST00000295927 DSTQ03001 7570 aaKnown RBP7.35□□□□□ -1.23
PTX3-201ENST00000295927 NEBP20929 6669 aa7.23□□□□□ -1.25
PTX3-201ENST00000295927 KRTAP2-3P0C7H8 128 aa7.06□□□□□ -1.28
PTX3-201ENST00000295927 LCE3BQ5TA77 95 aa7.06□□□□□ -1.28
PTX3-201ENST00000295927 KRTAP2-4Q9BYR9 128 aa7.06□□□□□ -1.28
PTX3-201ENST00000295927 KRTAP2-1Q9BYU5 128 aa7.06□□□□□ -1.28
PTX3-201ENST00000295927 KRTAP5-5Q701N2 237 aaPredicted RBP7.01□□□□□ -1.29
PTX3-201ENST00000295927 A0A0A0MQY5 61 aa6.9□□□□□ -1.3
PTX3-201ENST00000295927 MT1AP04731 61 aa6.89□□□□□ -1.31
PTX3-201ENST00000295927 KRTAP6-1Q3LI64 71 aa6.86□□□□□ -1.31
PTX3-201ENST00000295927 KRTAP5-4Q6L8H1 288 aa6.66□□□□□ -1.34
PTX3-201ENST00000295927 KRTAP2-2Q9BYT5 123 aa6.64□□□□□ -1.35
PTX3-201ENST00000295927 KRTAP20-1Q3LI63 56 aa6.64□□□□□ -1.35
PTX3-201ENST00000295927 SYNE1Q8NF91 8797 aaKnown RBP6.6□□□□□ -1.35
PTX3-201ENST00000295927 KRTAP9-4Q9BYQ2 154 aa6.55□□□□□ -1.36
PTX3-201ENST00000295927 LCE4AQ5TA78 99 aa6.5□□□□□ -1.37
PTX3-201ENST00000295927 KRTAP12-4P60329 112 aa6.48□□□□□ -1.37
PTX3-201ENST00000295927 INE1O15225 51 aa6.4□□□□□ -1.38
PTX3-201ENST00000295927 MT4P47944 62 aa6.4□□□□□ -1.38
PTX3-201ENST00000295927 KRTAP4-6Q9BYQ5 205 aa6.37□□□□□ -1.39
PTX3-201ENST00000295927 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
PTX3-201ENST00000295927 KRTAP6-2Q3LI66 62 aa6.31□□□□□ -1.4
PTX3-201ENST00000295927 LCE1DQ5T752 114 aa6.27□□□□□ -1.41
PTX3-201ENST00000295927 MT3P25713 68 aa6.23□□□□□ -1.41
PTX3-201ENST00000295927 KRTAP20-2Q3LI61 65 aa6.23□□□□□ -1.41
PTX3-201ENST00000295927 HMCN1Q96RW7 5635 aa6.18□□□□□ -1.42
PTX3-201ENST00000295927 LCE3DQ9BYE3 92 aa6.06□□□□□ -1.44
PTX3-201ENST00000295927 KRTAP5-2Q701N4 177 aa6.05□□□□□ -1.44
PTX3-201ENST00000295927 KRTAP5-3Q6L8H2 238 aa6□□□□□ -1.45
PTX3-201ENST00000295927 LCE3EQ5T5B0 92 aa5.89□□□□□ -1.47
PTX3-201ENST00000295927 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.5
PTX3-201ENST00000295927 AHNAK2Q8IVF2 5795 aa5.44□□□□□ -1.54
PTX3-201ENST00000295927 LCE1EQ5T753 118 aa5.38□□□□□ -1.55
PTX3-201ENST00000295927 KRTAP4-11Q9BYQ6 195 aa5.38□□□□□ -1.55
PTX3-201ENST00000295927 KRTAP5-1Q6L8H4 278 aa5.23□□□□□ -1.57
PTX3-201ENST00000295927 PRM1P04553 51 aa5.19□□□□□ -1.58
PTX3-201ENST00000295927 KRTAP5-8O75690 187 aa5.18□□□□□ -1.58
PTX3-201ENST00000295927 KRTAP4-12Q9BQ66 201 aa5.18□□□□□ -1.58
PTX3-201ENST00000295927 KRTAP5-10Q6L8G5 202 aa5.15□□□□□ -1.58
PTX3-201ENST00000295927 GPR98Q8WXG9 6306 aa5.15□□□□□ -1.59
PTX3-201ENST00000295927 LCE1BQ5T7P3 118 aa5.1□□□□□ -1.59
PTX3-201ENST00000295927 KRTAP9-9Q9BYP9 154 aa5.08□□□□□ -1.6
PTX3-201ENST00000295927 MUC5ACP98088 5654 aa5.07□□□□□ -1.6
PTX3-201ENST00000295927 KRTAP4-2Q9BYR5 136 aa5.05□□□□□ -1.6
PTX3-201ENST00000295927 LCE1CQ5T751 118 aa5.03□□□□□ -1.6
PTX3-201ENST00000295927 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
PTX3-201ENST00000295927 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.7□□□□□ -1.66
PTX3-201ENST00000295927 KRTAP21-2Q3LI59 83 aa4.48□□□□□ -1.69
PTX3-201ENST00000295927 MUC5BQ9HC84 5762 aaPredicted RBP4.43□□□□□ -1.7
PTX3-201ENST00000295927 KRTAP5-11Q6L8G4 156 aa4.42□□□□□ -1.7
PTX3-201ENST00000295927 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.74
PTX3-201ENST00000295927 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
PTX3-201ENST00000295927 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
PTX3-201ENST00000295927 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
PTX3-201ENST00000295927 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.86
PTX3-201ENST00000295927 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
PTX3-201ENST00000295927 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms