RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 NEBP20929 6669 aa10.13□□□□□ -0.79
CHCHD4-201ENST00000295767 KRTAP12-3P60328 96 aa10.09□□□□□ -0.79
CHCHD4-201ENST00000295767 PRAC1Q96KF2 57 aa10.04□□□□□ -0.8
CHCHD4-201ENST00000295767 PP632Q6XCG6 107 aa10.04□□□□□ -0.8
CHCHD4-201ENST00000295767 KRTAP19-3Q7Z4W3 81 aa9.97□□□□□ -0.81
CHCHD4-201ENST00000295767 MT1LQ93083 61 aa9.92□□□□□ -0.82
CHCHD4-201ENST00000295767 LCE5AQ5TCM9 118 aa9.89□□□□□ -0.83
CHCHD4-201ENST00000295767 SPRR2DP22532 72 aa9.83□□□□□ -0.84
CHCHD4-201ENST00000295767 MT1GP13640 62 aa9.81□□□□□ -0.84
CHCHD4-201ENST00000295767 KRTAP15-1Q3LI76 137 aa9.71□□□□□ -0.86
CHCHD4-201ENST00000295767 MT1MQ8N339 61 aa9.68□□□□□ -0.86
CHCHD4-201ENST00000295767 KRTAP20-1Q3LI63 56 aa9.6□□□□□ -0.87
CHCHD4-201ENST00000295767 KRTAP2-3P0C7H8 128 aa9.56□□□□□ -0.88
CHCHD4-201ENST00000295767 KRTAP2-4Q9BYR9 128 aa9.56□□□□□ -0.88
CHCHD4-201ENST00000295767 KRTAP4-7Q9BYR0 210 aa9.53□□□□□ -0.88
CHCHD4-201ENST00000295767 LCE3BQ5TA77 95 aa9.5□□□□□ -0.89
CHCHD4-201ENST00000295767 KRTAP19-4Q3LI73 84 aa9.49□□□□□ -0.89
CHCHD4-201ENST00000295767 KRTAP4-3Q9BYR4 195 aa9.46□□□□□ -0.89
CHCHD4-201ENST00000295767 LCE3CQ5T5A8 94 aa9.38□□□□□ -0.91
CHCHD4-201ENST00000295767 DSTQ03001 7570 aaKnown RBP9.34□□□□□ -0.91
CHCHD4-201ENST00000295767 KRTAP2-2Q9BYT5 123 aa9.31□□□□□ -0.92
CHCHD4-201ENST00000295767 KRTAP2-1Q9BYU5 128 aa9.31□□□□□ -0.92
CHCHD4-201ENST00000295767 LOC100996750A0A140TA64 210 aa8.97□□□□□ -0.97
CHCHD4-201ENST00000295767 KRTAP9-6A8MVA2 160 aa8.87□□□□□ -0.99
CHCHD4-201ENST00000295767 KRTAP5-5Q701N2 237 aaPredicted RBP8.8□□□□□ -1
CHCHD4-201ENST00000295767 KRTAP5-4Q6L8H1 288 aa8.74□□□□□ -1.01
CHCHD4-201ENST00000295767 LCE4AQ5TA78 99 aa8.72□□□□□ -1.01
CHCHD4-201ENST00000295767 KRTAP4-9Q9BYQ8 210 aa8.64□□□□□ -1.03
CHCHD4-201ENST00000295767 SPRR5A0A1B0GTR4 108 aa8.62□□□□□ -1.03
CHCHD4-201ENST00000295767 MT4P47944 62 aa8.55□□□□□ -1.04
CHCHD4-201ENST00000295767 LCE1DQ5T752 114 aa8.54□□□□□ -1.04
CHCHD4-201ENST00000295767 MT1AP04731 61 aa8.44□□□□□ -1.06
CHCHD4-201ENST00000295767 KRTAP4-6Q9BYQ5 205 aa8.41□□□□□ -1.06
CHCHD4-201ENST00000295767 KRTAP6-1Q3LI64 71 aa8.37□□□□□ -1.07
CHCHD4-201ENST00000295767 KRTAP12-4P60329 112 aa8.32□□□□□ -1.08
CHCHD4-201ENST00000295767 SYNE1Q8NF91 8797 aaKnown RBP8.32□□□□□ -1.08
CHCHD4-201ENST00000295767 HMCN1Q96RW7 5635 aa8.31□□□□□ -1.08
CHCHD4-201ENST00000295767 KRTAP20-2Q3LI61 65 aa8.2□□□□□ -1.1
CHCHD4-201ENST00000295767 LUZP6Q538Z0 58 aa8.14□□□□□ -1.11
CHCHD4-201ENST00000295767 NDUFAF8A1L188 74 aa8.07□□□□□ -1.12
CHCHD4-201ENST00000295767 KRTAP9-4Q9BYQ2 154 aa8.07□□□□□ -1.12
CHCHD4-201ENST00000295767 KRTAP5-3Q6L8H2 238 aa7.93□□□□□ -1.14
CHCHD4-201ENST00000295767 KRTAP6-2Q3LI66 62 aa7.82□□□□□ -1.16
CHCHD4-201ENST00000295767 KRTAP5-2Q701N4 177 aa7.81□□□□□ -1.16
CHCHD4-201ENST00000295767 AHNAK2Q8IVF2 5795 aa7.7□□□□□ -1.18
CHCHD4-201ENST00000295767 MT3P25713 68 aa7.66□□□□□ -1.18
CHCHD4-201ENST00000295767 KRTAP5-10Q6L8G5 202 aa7.49□□□□□ -1.21
CHCHD4-201ENST00000295767 GPR98Q8WXG9 6306 aa7.48□□□□□ -1.21
CHCHD4-201ENST00000295767 H3BS24 57 aa7.32□□□□□ -1.24
CHCHD4-201ENST00000295767 KRTAP4-11Q9BYQ6 195 aa7.27□□□□□ -1.25
CHCHD4-201ENST00000295767 OBSCNQ5VST9 7968 aa7.17□□□□□ -1.26
CHCHD4-201ENST00000295767 A0A0A0MQY5 61 aa7.14□□□□□ -1.27
CHCHD4-201ENST00000295767 KRTAP5-7Q6L8G8 165 aa7.06□□□□□ -1.28
CHCHD4-201ENST00000295767 KRTAP5-8O75690 187 aa7.02□□□□□ -1.29
CHCHD4-201ENST00000295767 LCE3DQ9BYE3 92 aa6.92□□□□□ -1.3
CHCHD4-201ENST00000295767 KRTAP5-1Q6L8H4 278 aa6.85□□□□□ -1.31
CHCHD4-201ENST00000295767 LCE1EQ5T753 118 aa6.83□□□□□ -1.32
CHCHD4-201ENST00000295767 INE1O15225 51 aa6.71□□□□□ -1.34
CHCHD4-201ENST00000295767 LCE3EQ5T5B0 92 aa6.64□□□□□ -1.35
CHCHD4-201ENST00000295767 MUC5ACP98088 5654 aa6.55□□□□□ -1.36
CHCHD4-201ENST00000295767 KRTAP9-9Q9BYP9 154 aa6.47□□□□□ -1.37
CHCHD4-201ENST00000295767 KRTAP4-2Q9BYR5 136 aa6.41□□□□□ -1.38
CHCHD4-201ENST00000295767 LCE1BQ5T7P3 118 aa6.4□□□□□ -1.38
CHCHD4-201ENST00000295767 LCE1CQ5T751 118 aa6.35□□□□□ -1.39
CHCHD4-201ENST00000295767 MUC5BQ9HC84 5762 aaPredicted RBP6.17□□□□□ -1.42
CHCHD4-201ENST00000295767 AHNAKQ09666 5890 aaKnown RBP6.02□□□□□ -1.45
CHCHD4-201ENST00000295767 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.88□□□□□ -1.47
CHCHD4-201ENST00000295767 KRTAP5-11Q6L8G4 156 aa5.68□□□□□ -1.5
CHCHD4-201ENST00000295767 KRTAP4-12Q9BQ66 201 aa5.52□□□□□ -1.53
CHCHD4-201ENST00000295767 KRTAP21-2Q3LI59 83 aa5.49□□□□□ -1.53
CHCHD4-201ENST00000295767 PRM1P04553 51 aa5.48□□□□□ -1.53
CHCHD4-201ENST00000295767 LCE1FQ5T754 118 aa5.3□□□□□ -1.56
CHCHD4-201ENST00000295767 KRTAP4-4Q9BYR3 166 aa4.93□□□□□ -1.62
CHCHD4-201ENST00000295767 PHGR1C9JFL3 82 aa4.88□□□□□ -1.63
CHCHD4-201ENST00000295767 MUC19Q7Z5P9 8384 aa4.35□□□□□ -1.71
CHCHD4-201ENST00000295767 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
CHCHD4-201ENST00000295767 MUC16Q8WXI7 14507 aa3.13□□□□□ -1.91
Retrieved 77 of 20,778 RNA–protein pairs in 67.5 ms