RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 CRCT1Q9UGL9 99 aa5.95□□□□□ -1.46
SYVN1-201ENST00000294256 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
SYVN1-201ENST00000294256 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
SYVN1-201ENST00000294256 MT1GP13640 62 aa5.85□□□□□ -1.47
SYVN1-201ENST00000294256 MACF1Q9UPN3 7388 aaKnown RBP5.78□□□□□ -1.48
SYVN1-201ENST00000294256 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
SYVN1-201ENST00000294256 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
SYVN1-201ENST00000294256 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
SYVN1-201ENST00000294256 SPRR2FQ96RM1 72 aa5.74□□□□□ -1.49
SYVN1-201ENST00000294256 MT1MQ8N339 61 aa5.72□□□□□ -1.49
SYVN1-201ENST00000294256 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
SYVN1-201ENST00000294256 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
SYVN1-201ENST00000294256 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.51
SYVN1-201ENST00000294256 MDN1Q9NU22 5596 aa5.61□□□□□ -1.51
SYVN1-201ENST00000294256 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
SYVN1-201ENST00000294256 LCE5AQ5TCM9 118 aa5.49□□□□□ -1.53
SYVN1-201ENST00000294256 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
SYVN1-201ENST00000294256 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
SYVN1-201ENST00000294256 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
SYVN1-201ENST00000294256 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
SYVN1-201ENST00000294256 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
SYVN1-201ENST00000294256 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
SYVN1-201ENST00000294256 LCE1AQ5T7P2 110 aa5.22□□□□□ -1.57
SYVN1-201ENST00000294256 SPRR2EP22531 72 aa5.21□□□□□ -1.57
SYVN1-201ENST00000294256 SPRR2BP35325 72 aa5.21□□□□□ -1.57
SYVN1-201ENST00000294256 SPRR2AP35326 72 aa5.21□□□□□ -1.57
SYVN1-201ENST00000294256 KRTAP5-9P26371 169 aa5.06□□□□□ -1.6
SYVN1-201ENST00000294256 MT1AP04731 61 aa5.05□□□□□ -1.6
SYVN1-201ENST00000294256 SPRR2DP22532 72 aa4.97□□□□□ -1.61
SYVN1-201ENST00000294256 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
SYVN1-201ENST00000294256 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
SYVN1-201ENST00000294256 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
SYVN1-201ENST00000294256 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
SYVN1-201ENST00000294256 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
SYVN1-201ENST00000294256 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
SYVN1-201ENST00000294256 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
SYVN1-201ENST00000294256 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
SYVN1-201ENST00000294256 PRM1P04553 51 aa4.68□□□□□ -1.66
SYVN1-201ENST00000294256 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
SYVN1-201ENST00000294256 MT3P25713 68 aa4.58□□□□□ -1.68
SYVN1-201ENST00000294256 MT4P47944 62 aa4.53□□□□□ -1.68
SYVN1-201ENST00000294256 NEBP20929 6669 aa4.47□□□□□ -1.69
SYVN1-201ENST00000294256 KRTAP4-6Q9BYQ5 205 aa4.47□□□□□ -1.69
SYVN1-201ENST00000294256 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
SYVN1-201ENST00000294256 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
SYVN1-201ENST00000294256 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.73
SYVN1-201ENST00000294256 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
SYVN1-201ENST00000294256 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
SYVN1-201ENST00000294256 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
SYVN1-201ENST00000294256 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
SYVN1-201ENST00000294256 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
SYVN1-201ENST00000294256 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
SYVN1-201ENST00000294256 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
SYVN1-201ENST00000294256 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
SYVN1-201ENST00000294256 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
SYVN1-201ENST00000294256 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
SYVN1-201ENST00000294256 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
SYVN1-201ENST00000294256 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
SYVN1-201ENST00000294256 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
SYVN1-201ENST00000294256 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
SYVN1-201ENST00000294256 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.86
SYVN1-201ENST00000294256 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
SYVN1-201ENST00000294256 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
SYVN1-201ENST00000294256 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
SYVN1-201ENST00000294256 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
SYVN1-201ENST00000294256 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
SYVN1-201ENST00000294256 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
SYVN1-201ENST00000294256 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
SYVN1-201ENST00000294256 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
SYVN1-201ENST00000294256 GPR98Q8WXG9 6306 aa2.96□□□□□ -1.94
SYVN1-201ENST00000294256 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
SYVN1-201ENST00000294256 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
SYVN1-201ENST00000294256 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
SYVN1-201ENST00000294256 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
SYVN1-201ENST00000294256 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
SYVN1-201ENST00000294256 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
SYVN1-201ENST00000294256 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms