RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
ABCF3-201ENST00000292808 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
ABCF3-201ENST00000292808 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.64
ABCF3-201ENST00000292808 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
ABCF3-201ENST00000292808 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
ABCF3-201ENST00000292808 SYNE2Q8WXH0 6885 aaKnown RBP4.78□□□□□ -1.64
ABCF3-201ENST00000292808 MT1MQ8N339 61 aa4.74□□□□□ -1.65
ABCF3-201ENST00000292808 MT1GP13640 62 aa4.73□□□□□ -1.65
ABCF3-201ENST00000292808 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
ABCF3-201ENST00000292808 LCE5AQ5TCM9 118 aa4.7□□□□□ -1.66
ABCF3-201ENST00000292808 KRTAP5-9P26371 169 aa4.69□□□□□ -1.66
ABCF3-201ENST00000292808 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
ABCF3-201ENST00000292808 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
ABCF3-201ENST00000292808 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
ABCF3-201ENST00000292808 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
ABCF3-201ENST00000292808 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
ABCF3-201ENST00000292808 LCE1AQ5T7P2 110 aa4.59□□□□□ -1.67
ABCF3-201ENST00000292808 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
ABCF3-201ENST00000292808 MDN1Q9NU22 5596 aa4.58□□□□□ -1.68
ABCF3-201ENST00000292808 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
ABCF3-201ENST00000292808 SPRR2EP22531 72 aa4.49□□□□□ -1.69
ABCF3-201ENST00000292808 SPRR2BP35325 72 aa4.49□□□□□ -1.69
ABCF3-201ENST00000292808 SPRR2AP35326 72 aa4.49□□□□□ -1.69
ABCF3-201ENST00000292808 DSTQ03001 7570 aaKnown RBP4.47□□□□□ -1.69
ABCF3-201ENST00000292808 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
ABCF3-201ENST00000292808 SPRR2DP22532 72 aa4.32□□□□□ -1.72
ABCF3-201ENST00000292808 NEBP20929 6669 aa4.28□□□□□ -1.73
ABCF3-201ENST00000292808 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
ABCF3-201ENST00000292808 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
ABCF3-201ENST00000292808 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
ABCF3-201ENST00000292808 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
ABCF3-201ENST00000292808 MT1AP04731 61 aa4.19□□□□□ -1.74
ABCF3-201ENST00000292808 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
ABCF3-201ENST00000292808 LCE3BQ5TA77 95 aa4.17□□□□□ -1.74
ABCF3-201ENST00000292808 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
ABCF3-201ENST00000292808 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
ABCF3-201ENST00000292808 KRTAP12-4P60329 112 aa4.04□□□□□ -1.76
ABCF3-201ENST00000292808 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
ABCF3-201ENST00000292808 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
ABCF3-201ENST00000292808 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
ABCF3-201ENST00000292808 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
ABCF3-201ENST00000292808 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
ABCF3-201ENST00000292808 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
ABCF3-201ENST00000292808 KRTAP4-6Q9BYQ5 205 aa3.81□□□□□ -1.8
ABCF3-201ENST00000292808 MT4P47944 62 aa3.78□□□□□ -1.8
ABCF3-201ENST00000292808 KRTAP20-1Q3LI63 56 aa3.76□□□□□ -1.81
ABCF3-201ENST00000292808 MT3P25713 68 aa3.76□□□□□ -1.81
ABCF3-201ENST00000292808 KRTAP20-2Q3LI61 65 aa3.71□□□□□ -1.82
ABCF3-201ENST00000292808 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
ABCF3-201ENST00000292808 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
ABCF3-201ENST00000292808 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
ABCF3-201ENST00000292808 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
ABCF3-201ENST00000292808 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
ABCF3-201ENST00000292808 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.84
ABCF3-201ENST00000292808 PRM1P04553 51 aa3.54□□□□□ -1.84
ABCF3-201ENST00000292808 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
ABCF3-201ENST00000292808 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
ABCF3-201ENST00000292808 KRTAP4-11Q9BYQ6 195 aa3.16□□□□□ -1.9
ABCF3-201ENST00000292808 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
ABCF3-201ENST00000292808 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
ABCF3-201ENST00000292808 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
ABCF3-201ENST00000292808 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
ABCF3-201ENST00000292808 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
ABCF3-201ENST00000292808 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
ABCF3-201ENST00000292808 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
ABCF3-201ENST00000292808 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
ABCF3-201ENST00000292808 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
ABCF3-201ENST00000292808 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
ABCF3-201ENST00000292808 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
ABCF3-201ENST00000292808 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.98
ABCF3-201ENST00000292808 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
ABCF3-201ENST00000292808 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
ABCF3-201ENST00000292808 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
ABCF3-201ENST00000292808 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
ABCF3-201ENST00000292808 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
ABCF3-201ENST00000292808 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
ABCF3-201ENST00000292808 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 105.8 ms