RNA–Protein interactions for RNA: ENST00000289893.8

MACF1-201, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5 BASIC

Gene MACF1, Length 19,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-201ENST00000289893 MT1LQ93083 61 aa1.15□□□□□ -2.23
MACF1-201ENST00000289893 MT1EP04732 61 aa1.15□□□□□ -2.23
MACF1-201ENST00000289893 PRM1P04553 51 aa1.14□□□□□ -2.23
MACF1-201ENST00000289893 FSIP2Q5CZC0 6907 aa1.13□□□□□ -2.23
MACF1-201ENST00000289893 USH2AO75445 5202 aa1.13□□□□□ -2.23
MACF1-201ENST00000289893 MT4P47944 62 aa1.12□□□□□ -2.23
MACF1-201ENST00000289893 KRTAP4-7Q9BYR0 210 aa1.12□□□□□ -2.23
MACF1-201ENST00000289893 KRTAP19-3Q7Z4W3 81 aa1.11□□□□□ -2.23
MACF1-201ENST00000289893 LCE1AQ5T7P2 110 aa1.11□□□□□ -2.23
MACF1-201ENST00000289893 MACF1Q9UPN3 7388 aaKnown RBP1.11□□□□□ -2.23
MACF1-201ENST00000289893 LCE1BQ5T7P3 118 aa1.1□□□□□ -2.23
MACF1-201ENST00000289893 LCE1DQ5T752 114 aa1.1□□□□□ -2.23
MACF1-201ENST00000289893 SYNE2Q8WXH0 6885 aaKnown RBP1.1□□□□□ -2.23
MACF1-201ENST00000289893 LCE4AQ5TA78 99 aa1.08□□□□□ -2.24
MACF1-201ENST00000289893 MT1MQ8N339 61 aa1.08□□□□□ -2.24
MACF1-201ENST00000289893 DSTQ03001 7570 aaKnown RBP1.08□□□□□ -2.24
MACF1-201ENST00000289893 LOC100996750A0A140TA64 210 aa1.08□□□□□ -2.24
MACF1-201ENST00000289893 KRTAP2-3P0C7H8 128 aa1.06□□□□□ -2.24
MACF1-201ENST00000289893 KRTAP2-4Q9BYR9 128 aa1.06□□□□□ -2.24
MACF1-201ENST00000289893 KRTAP2-1Q9BYU5 128 aa1.06□□□□□ -2.24
MACF1-201ENST00000289893 KRTAP19-7Q3SYF9 63 aa1.06□□□□□ -2.24
MACF1-201ENST00000289893 KRTAP4-3Q9BYR4 195 aa1.06□□□□□ -2.24
MACF1-201ENST00000289893 MT1AP04731 61 aa1.05□□□□□ -2.24
MACF1-201ENST00000289893 MUC2Q02817 5179 aa1.04□□□□□ -2.24
MACF1-201ENST00000289893 KRTAP4-9Q9BYQ8 210 aa1.04□□□□□ -2.24
MACF1-201ENST00000289893 SSPOA2VEC9 5147 aa1.03□□□□□ -2.24
MACF1-201ENST00000289893 LCE5AQ5TCM9 118 aa1.03□□□□□ -2.24
MACF1-201ENST00000289893 MDN1Q9NU22 5596 aa1.02□□□□□ -2.25
MACF1-201ENST00000289893 MUC12Q9UKN1 5478 aa1.02□□□□□ -2.25
MACF1-201ENST00000289893 KRTAP6-3Q3LI67 103 aa1.02□□□□□ -2.25
MACF1-201ENST00000289893 KMT2DO14686 5537 aa1.01□□□□□ -2.25
MACF1-201ENST00000289893 GPR98Q8WXG9 6306 aa1.01□□□□□ -2.25
MACF1-201ENST00000289893 KRTAP9-2Q9BYQ4 174 aa1□□□□□ -2.25
MACF1-201ENST00000289893 KRTAP9-6A0A140TA67 174 aa0.99□□□□□ -2.25
MACF1-201ENST00000289893 KRTAP9-4Q9BYQ2 154 aa0.99□□□□□ -2.25
MACF1-201ENST00000289893 KRTAP9-7A8MTY7 169 aa0.99□□□□□ -2.25
MACF1-201ENST00000289893 KRTAP6-2Q3LI66 62 aa0.98□□□□□ -2.25
MACF1-201ENST00000289893 LCE1CQ5T751 118 aa0.98□□□□□ -2.25
MACF1-201ENST00000289893 LCE1EQ5T753 118 aa0.98□□□□□ -2.25
MACF1-201ENST00000289893 LCE1FQ5T754 118 aa0.98□□□□□ -2.25
MACF1-201ENST00000289893 SYNE1Q8NF91 8797 aaKnown RBP0.98□□□□□ -2.25
MACF1-201ENST00000289893 KRTAP5-9P26371 169 aa0.97□□□□□ -2.25
MACF1-201ENST00000289893 KRTAP2-2Q9BYT5 123 aa0.97□□□□□ -2.25
MACF1-201ENST00000289893 FCGBPQ9Y6R7 5405 aaPredicted RBP0.96□□□□□ -2.25
MACF1-201ENST00000289893 KRTAP20-1Q3LI63 56 aa0.95□□□□□ -2.26
MACF1-201ENST00000289893 NEBP20929 6669 aa0.95□□□□□ -2.26
MACF1-201ENST00000289893 HMCN1Q96RW7 5635 aa0.93□□□□□ -2.26
MACF1-201ENST00000289893 KRTAP9-6A8MVA2 160 aa0.92□□□□□ -2.26
MACF1-201ENST00000289893 KRTAP6-1Q3LI64 71 aa0.92□□□□□ -2.26
MACF1-201ENST00000289893 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.27
MACF1-201ENST00000289893 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.88□□□□□ -2.27
MACF1-201ENST00000289893 KRTAP4-11Q9BYQ6 195 aa0.87□□□□□ -2.27
MACF1-201ENST00000289893 KRTAP5-5Q701N2 237 aaPredicted RBP0.86□□□□□ -2.27
MACF1-201ENST00000289893 OBSCNQ5VST9 7968 aa0.85□□□□□ -2.27
MACF1-201ENST00000289893 KRTAP9-9Q9BYP9 154 aa0.84□□□□□ -2.28
MACF1-201ENST00000289893 KRTAP5-4Q6L8H1 288 aa0.83□□□□□ -2.28
MACF1-201ENST00000289893 AHNAKQ09666 5890 aaKnown RBP0.8□□□□□ -2.28
MACF1-201ENST00000289893 KRTAP20-2Q3LI61 65 aa0.79□□□□□ -2.28
MACF1-201ENST00000289893 KRTAP4-12Q9BQ66 201 aa0.77□□□□□ -2.29
MACF1-201ENST00000289893 KRTAP4-4Q9BYR3 166 aa0.77□□□□□ -2.29
MACF1-201ENST00000289893 KRTAP4-2Q9BYR5 136 aa0.75□□□□□ -2.29
MACF1-201ENST00000289893 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
MACF1-201ENST00000289893 KRTAP5-2Q701N4 177 aa0.74□□□□□ -2.29
MACF1-201ENST00000289893 KRTAP4-6Q9BYQ5 205 aa0.74□□□□□ -2.29
MACF1-201ENST00000289893 MUC5ACP98088 5654 aa0.73□□□□□ -2.29
MACF1-201ENST00000289893 KRTAP5-3Q6L8H2 238 aa0.69□□□□□ -2.3
MACF1-201ENST00000289893 MUC19Q7Z5P9 8384 aa0.69□□□□□ -2.3
MACF1-201ENST00000289893 KRTAP5-8O75690 187 aa0.68□□□□□ -2.3
MACF1-201ENST00000289893 KRTAP5-7Q6L8G8 165 aa0.66□□□□□ -2.3
MACF1-201ENST00000289893 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.65□□□□□ -2.31
MACF1-201ENST00000289893 KRTAP5-10Q6L8G5 202 aa0.64□□□□□ -2.31
MACF1-201ENST00000289893 KRTAP5-11Q6L8G4 156 aa0.63□□□□□ -2.31
MACF1-201ENST00000289893 KRTAP5-1Q6L8H4 278 aa0.62□□□□□ -2.31
MACF1-201ENST00000289893 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
MACF1-201ENST00000289893 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
MACF1-201ENST00000289893 KRTAP21-2Q3LI59 83 aa0.52□□□□□ -2.33
MACF1-201ENST00000289893 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms